Factsheet for HORVU7Hr1G070490.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome, cytosol

Predictor Summary:

cytosol 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, peroxisome
Any Predictor:	cytosol, mitochondrion, peroxisome
MultiLoc:	cytosol
TargetP:	mitochondrion
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G294700.1	Wheat	cytosol, nucleus, peroxisome	92.36	93.66
TraesCS7A01G299100.1	Wheat	cytosol, nucleus, plastid	92.36	93.66
TraesCS7B01G187300.1	Wheat	cytosol, nucleus, peroxisome	92.01	93.31
Os08t0159700-01	Rice	cytosol	82.99	82.7
KXG24494	Sorghum	nucleus	82.29	79.53
Zm00001d024537_P001	Maize	cytosol, endoplasmic reticulum, nucleus	79.86	79.04
Zm00001d049521_P001	Maize	cytosol, endoplasmic reticulum, peroxisome	80.56	77.59
GSMUA_Achr9P23390_001	Banana	plastid	56.6	64.17
GSMUA_Achr3P27580_001	Banana	cytosol, nucleus, plastid	50.69	58.17
HORVU6Hr1G037630.1	Barley	nucleus	53.12	49.51
HORVU6Hr1G037640.1	Barley	nucleus	53.12	49.51
HORVU4Hr1G060280.1	Barley	cytosol, nucleus, plastid	42.36	47.66
HORVU7Hr1G020390.1	Barley	mitochondrion	31.25	47.62
HORVU6Hr1G010470.2	Barley	cytosol, nucleus, peroxisome	43.06	44.13
HORVU4Hr1G000870.2	Barley	nucleus	43.75	43.9
HORVU6Hr1G091740.1	Barley	cytosol	44.1	43.49
HORVU4Hr1G015750.1	Barley	mitochondrion	40.97	42.45
HORVU1Hr1G008650.1	Barley	mitochondrion, nucleus, peroxisome	46.53	41.61
HORVU6Hr1G070090.1	Barley	plastid	47.57	41.39
HORVU3Hr1G033710.2	Barley	plastid	30.56	41.31
HORVU7Hr1G046930.1	Barley	cytosol, nucleus, peroxisome	44.1	40.19
HORVU7Hr1G017700.2	Barley	nucleus	47.22	38.97
HORVU7Hr1G093230.2	Barley	cytosol	33.33	31.68
HORVU0Hr1G011700.1	Barley	cytosol	21.18	28.24
HORVU3Hr1G108820.1	Barley	mitochondrion	23.61	26.56

Protein Annotations

Gene3D:3.30.1330.80	MapMan:35.1	UniProt:A0A287WT71	InterPro:AT-hook_nuclear	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003680	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:HORVU7Hr1G070490	EnsemblPlants:HORVU7Hr1G070490.2	InterPro:IPR005175
PFAM:PF03479	PIRSF:PIRSF016021	InterPro:PPC_dom	PFscan:PS51742	PANTHER:PTHR31100	PANTHER:PTHR31100:SF6
SUPFAM:SSF117856	UniParc:UPI000B4821A8	SEG:seg	:	:	:

Description

AT-hook motif nuclear-localized protein [Source:UniProtKB/TrEMBL;Acc:A0A287WT71]

Coordinates

chrchr7H:-:383285444..383286459

Molecular Weight (calculated)

28982.2 Da

IEP (calculated)

7.216

GRAVY (calculated)

-0.127

Length

288 amino acids

Sequence
(BLAST)

001: ARMAGLDLGT NSYLQHHQQL HFRHDDGAGG SDDRQDALSP GRSGGSAAVG AGIGGSEVVG RRPRGRPPGS KNKPKPPVII TRESANALRA HILEVAAGCD
101: VFEALTAYAR RRQRGVCVLS AAGAVTNVTL RQPQSAQSGP GSPAVATLHG RFEILSLAGS FLPPPAPPGA TSLSAFLAGG QGQVVGGSVA GALVAAGPVV
201: VVASSFSNVA YERLPLEDGD EVVPTQPPGG SESDQAGNGM PFGVDPSGGS AAAGLPFFNL PMGLPPMPMD VHNSWPGAAG GVERPPFS

Best Arabidopsis Sequence Match ( AT2G35270.1 )
(BLAST)

001: MAGLDLGTTS RYVHNVDGGG GGQFTTDNHH EDDGGAGGNH HHHHHNHNHH QGLDLIASND NSGLGGGGGG GSGDLVMRRP RGRPAGSKNK PKPPVIVTRE
101: SANTLRAHIL EVGSGCDVFE CISTYARRRQ RGICVLSGTG TVTNVSIRQP TAAGAVVTLR GTFEILSLSG SFLPPPAPPG ATSLTIFLAG AQGQVVGGNV
201: VGELMAAGPV MVMAASFTNV AYERLPLDEH EEHLQSGGGG GGGNMYSEAT GGGGGLPFFN LPMSMPQIGV ESWQGNHAGA GRAPF

Arabidopsis Description

AHL21AT-hook motif nuclear-localized protein 21 [Source:UniProtKB/Swiss-Prot;Acc:O82166]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.