Factsheet for Os08t0159700-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G294700.1	Wheat	cytosol, nucleus, peroxisome	85.47	86.97
TraesCS7B01G187300.1	Wheat	cytosol, nucleus, peroxisome	85.47	86.97
TraesCS7A01G299100.1	Wheat	cytosol, nucleus, plastid	85.47	86.97
Zm00001d024537_P001	Maize	cytosol, endoplasmic reticulum, nucleus	86.16	85.57
KXG24494	Sorghum	nucleus	87.89	85.23
HORVU7Hr1G070490.2	Barley	cytosol, mitochondrion, peroxisome	82.7	82.99
Zm00001d049521_P001	Maize	cytosol, endoplasmic reticulum, peroxisome	85.12	82.27
GSMUA_Achr9P23390_001	Banana	plastid	58.82	66.93
GSMUA_Achr3P27580_001	Banana	cytosol, nucleus, plastid	53.63	61.75
Os04t0590200-01	Rice	cytosol	62.63	59.34
Os08t0563200-01	Rice	cytosol	42.91	52.77
Os02t0448000-00	Rice	nucleus	54.67	50.0
Os02t0820800-00	Rice	cytosol, nucleus, peroxisome	44.29	48.12
Os03t0270000-01	Rice	nucleus	40.48	45.35
Os07t0235200-01	Rice	endoplasmic reticulum, extracellular	28.37	43.39
Os06t0136900-01	Rice	nucleus	48.1	42.38
Os02t0713700-01	Rice	cytosol, mitochondrion, nucleus, plastid	47.75	41.07
Os06t0326900-01	Rice	nucleus	44.29	39.75
Os01t0246601-00	Rice	plastid	31.14	39.47
Os01t0953801-00	Rice	nucleus	32.53	35.47
Os08t0478466-01	Rice	nucleus	35.64	31.79
Os09t0464300-00	Rice	nucleus	36.68	31.74

Protein Annotations

Gene3D:3.30.1330.80	MapMan:35.1	EntrezGene:4344714	InterPro:AT-hook_nuclear	ProteinID:BAC66727.1	ProteinID:BAC99660.1
ProteinID:BAF22957.1	ProteinID:BAT03924.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003680
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	InterPro:IPR005175	EnsemblPlantsGene:Os08g0159700	EnsemblPlants:Os08t0159700-01	PFAM:PF03479	PIRSF:PIRSF016021
InterPro:PPC_dom	PFscan:PS51742	PANTHER:PTHR31100	PANTHER:PTHR31100:SF6	UniProt:Q84UQ4	SUPFAM:SSF117856
UniParc:UPI000017D1D0	RefSeq:XP_015648814.1	RefSeq:XP_015648815.1	SEG:seg	:	:

Description

Protein of unknown function DUF296 domain containing protein. (Os08t0159700-01)

Coordinates

chr8:-:3493417..3494794

Molecular Weight (calculated)

28300.5 Da

IEP (calculated)

6.796

GRAVY (calculated)

-0.045

Length

289 amino acids

Sequence
(BLAST)

001: MAGLDLGTSY LHHHQSLHLR HDDGGAGSDD GGHDDLSPGS GGGGGPSSTA GGAGIGGGEV VARRPRGRPP GSKNKPKPPV IITRESANAL RAHILEVAAG
101: CDVFEALTAY ARRRQRGVCV LSAAGTVANV TLRQPQSAQP GPASPAVATL HGRFEILSLA GSFLPPPAPP GATSLAAFLA GGQGQVVGGS VAGALIAAGP
201: VVVVAASFSN VAYERLPLED GDEVVPPAPA GSDQGGGGSG GMPPLGVDPS GGAATGGLPF FNMPFGMPPM PVDGHAGWPG AGVGRPPFS

Best Arabidopsis Sequence Match ( AT2G35270.1 )
(BLAST)

001: MAGLDLGTTS RYVHNVDGGG GGQFTTDNHH EDDGGAGGNH HHHHHNHNHH QGLDLIASND NSGLGGGGGG GSGDLVMRRP RGRPAGSKNK PKPPVIVTRE
101: SANTLRAHIL EVGSGCDVFE CISTYARRRQ RGICVLSGTG TVTNVSIRQP TAAGAVVTLR GTFEILSLSG SFLPPPAPPG ATSLTIFLAG AQGQVVGGNV
201: VGELMAAGPV MVMAASFTNV AYERLPLDEH EEHLQSGGGG GGGNMYSEAT GGGGGLPFFN LPMSMPQIGV ESWQGNHAGA GRAPF

Arabidopsis Description

AHL21AT-hook motif nuclear-localized protein 21 [Source:UniProtKB/Swiss-Prot;Acc:O82166]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.