Factsheet for Os04t0590200-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 2
cytosol 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d002495_P001	Maize	cytosol, nucleus, peroxisome	89.84	88.67
EES12751	Sorghum	cytosol, nucleus, peroxisome	90.49	88.46
Zm00001d026035_P001	Maize	cytosol, nucleus, peroxisome	89.84	88.39
TraesCS2D01G448700.1	Wheat	cytosol, nucleus, peroxisome	87.21	84.98
TraesCS2B01G470600.1	Wheat	cytosol, nucleus, peroxisome	87.21	84.98
TraesCS2A01G449300.1	Wheat	cytosol, nucleus, peroxisome	87.21	84.44
KRH00993	Soybean	nucleus	62.62	71.27
KRH28289	Soybean	cytosol	58.03	70.8
KRH77205	Soybean	nucleus	57.7	70.4
KRH40225	Soybean	nucleus	61.97	70.0
Solyc01g080960.2.1	Tomato	nucleus	57.38	66.04
PGSC0003DMT400004515	Potato	nucleus	47.54	64.73
Os08t0159700-01	Rice	cytosol	59.34	62.63
VIT_15s0045g01130.t01	Wine grape	cytosol, plastid	46.56	57.72
Os08t0563200-01	Rice	cytosol	40.66	52.77
Os02t0448000-00	Rice	nucleus	52.79	50.95
Os02t0820800-00	Rice	cytosol, nucleus, peroxisome	42.95	49.25
Os03t0270000-01	Rice	nucleus	39.67	46.9
Os07t0235200-01	Rice	endoplasmic reticulum, extracellular	28.2	45.5
Os02t0713700-01	Rice	cytosol, mitochondrion, nucleus, plastid	49.84	45.24
Os06t0136900-01	Rice	nucleus	44.92	41.77
Os06t0326900-01	Rice	nucleus	41.97	39.75
Os01t0246601-00	Rice	plastid	29.51	39.47
Os01t0953801-00	Rice	nucleus	30.49	35.09
Os08t0478466-01	Rice	nucleus	33.44	31.48
Os09t0464300-00	Rice	nucleus	34.43	31.44

Protein Annotations

Gene3D:3.30.1330.80	MapMan:35.1	EntrezGene:4336818	EMBL:AK243291	InterPro:AT-hook_nuclear	ProteinID:BAF15618.1
ProteinID:BAS90743.1	ProteinID:CAE04868.2	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003680
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	InterPro:IPR005175	EnsemblPlantsGene:Os04g0590200	EnsemblPlants:Os04t0590200-01	PFAM:PF03479	PIRSF:PIRSF016021
InterPro:PPC_dom	PFscan:PS51742	PANTHER:PTHR31100	PANTHER:PTHR31100:SF14	UniProt:Q7XLZ3	SUPFAM:SSF117856
UniParc:UPI00001B19E9	RefSeq:XP_015634050.1	SEG:seg	:	:	:

Description

Protein of unknown function DUF296 domain containing protein. (Os04t0590200-01)

Coordinates

chr4:-:29831246..29832981

Molecular Weight (calculated)

30693.1 Da

IEP (calculated)

6.674

GRAVY (calculated)

-0.248

Length

305 amino acids

Sequence
(BLAST)

001: MAGLDLGTAA TRYVHQLHHL HPDLQLQHSY AKQHEPSDDD PNGSGGGGNS NGGPYGDHDG GSSSSGPATD GAVGGPGDVV ARRPRGRPPG SKNKPKPPVI
101: ITRESANTLR AHILEVGSGC DVFECVSTYA RRRQRGVCVL SGSGVVTNVT LRQPSAPAGA VVSLHGRFEI LSLSGSFLPP PAPPGATSLT IFLAGGQGQV
201: VGGNVVGALY AAGPVIVIAA SFANVAYERL PLEEEEAPPP QAGLQMQQPG GGADAGGMGG AFPPDPSAAG LPFFNLPLNN MPGGGGSQLP PGADGHGWAG
301: ARPPF

Best Arabidopsis Sequence Match ( AT4G17800.1 )
(BLAST)

001: MAGLDLGTAF RYVNHQLHRP DLHLHHNSSS DDVTPGAGMG HFTVDDEDNN NNHQGLDLAS GGGSGSSGGG GGHGGGGDVV GRRPRGRPPG SKNKPKPPVI
101: ITRESANTLR AHILEVTNGC DVFDCVATYA RRRQRGICVL SGSGTVTNVS IRQPSAAGAV VTLQGTFEIL SLSGSFLPPP APPGATSLTI FLAGGQGQVV
201: GGSVVGELTA AGPVIVIAAS FTNVAYERLP LEEDEQQQQL GGGSNGGGNL FPEVAAGGGG GLPFFNLPMN MQPNVQLPVE GWPGNSGGRG PF

Arabidopsis Description

AHL23AT-hook motif nuclear-localized protein 23 [Source:UniProtKB/Swiss-Prot;Acc:O23620]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.