Factsheet for Solyc01g080960.2.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
Predotar:	plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400004515	Potato	nucleus	82.26	97.32
KRH00993	Soybean	nucleus	69.06	68.28
KRH40225	Soybean	nucleus	68.3	67.04
Solyc08g077010.1.1	Tomato	cytosol	63.77	58.68
Solyc06g060500.1.1	Tomato	nucleus	48.3	58.18
Os04t0590200-01	Rice	cytosol	66.04	57.38
Zm00001d026035_P001	Maize	cytosol, nucleus, peroxisome	65.66	56.13
Zm00001d002495_P001	Maize	cytosol, nucleus, peroxisome	65.28	55.99
EES12751	Sorghum	cytosol, nucleus, peroxisome	65.66	55.77
TraesCS2B01G470600.1	Wheat	cytosol, nucleus, peroxisome	65.66	55.59
TraesCS2D01G448700.1	Wheat	cytosol, nucleus, peroxisome	65.66	55.59
TraesCS2A01G449300.1	Wheat	cytosol, nucleus, peroxisome	65.28	54.92
VIT_15s0045g01130.t01	Wine grape	cytosol, plastid	49.43	53.25
Solyc07g056300.1.1	Tomato	cytosol, nucleus, peroxisome	47.17	49.8
Solyc11g006090.1.1	Tomato	nucleus	46.42	48.24
Solyc04g082810.2.1	Tomato	cytosol, nucleus, peroxisome	44.53	48.16
Solyc01g091470.2.1	Tomato	nucleus	53.58	47.02
Solyc08g079720.2.1	Tomato	nucleus	50.94	46.23
Solyc09g089620.1.1	Tomato	nucleus	49.81	46.15
Solyc08g007560.1.1	Tomato	nucleus	50.19	41.69
Solyc05g053000.1.1	Tomato	nucleus	48.3	40.89
Solyc12g087950.1.1	Tomato	nucleus	30.19	30.08
Solyc04g076220.2.1	Tomato	nucleus	37.74	29.76

Protein Annotations

Gene3D:3.30.1330.80	MapMan:35.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003680
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR005175	UniProt:K4AXY8	PFAM:PF03479	InterPro:PPC_dom	PFscan:PS51742	PANTHER:PTHR31100
PANTHER:PTHR31100:SF21	SUPFAM:SSF117856	EnsemblPlantsGene:Solyc01g080960.2	EnsemblPlants:Solyc01g080960.2.1	UniParc:UPI0001D64A08	SEG:seg

Description

No Description!

Coordinates

chr1:-:80288926..80289956

Molecular Weight (calculated)

28126.8 Da

IEP (calculated)

6.893

GRAVY (calculated)

-0.504

Length

265 amino acids

Sequence
(BLAST)

001: MAGLDLGSAS HHRFLPRHLH DPQDDEINRN NTQFSDDDNN NNDNNNNNSP GVARRPRGRP AGSKNKPKPP VIITRESANA LRAHILEVSS GHDVFESVAT
101: YARKRQRGIC ILSGSGTVNN VTIRQPQAAG SVVTLHGRFE ILSLSGSFLP PPAPPGATSL TIYLAGGQGQ VVGGNVVGAL IASGPVIVIA SSFTNVAYER
201: LPLDEENESI QMQQQGQSGN FADPSNIGLP FLNLPLNMPN GGGQLQLESG GGEGWNGNTT NRPQY

Best Arabidopsis Sequence Match ( AT2G35270.1 )
(BLAST)

001: MAGLDLGTTS RYVHNVDGGG GGQFTTDNHH EDDGGAGGNH HHHHHNHNHH QGLDLIASND NSGLGGGGGG GSGDLVMRRP RGRPAGSKNK PKPPVIVTRE
101: SANTLRAHIL EVGSGCDVFE CISTYARRRQ RGICVLSGTG TVTNVSIRQP TAAGAVVTLR GTFEILSLSG SFLPPPAPPG ATSLTIFLAG AQGQVVGGNV
201: VGELMAAGPV MVMAASFTNV AYERLPLDEH EEHLQSGGGG GGGNMYSEAT GGGGGLPFFN LPMSMPQIGV ESWQGNHAGA GRAPF

Arabidopsis Description

AHL21AT-hook motif nuclear-localized protein 21 [Source:UniProtKB/Swiss-Prot;Acc:O82166]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.