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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 6
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH40225 Soybean nucleus 96.64 95.93
KRH28289 Soybean cytosol 67.16 72.0
KRH77205 Soybean nucleus 66.42 71.2
Solyc01g080960.2.1 Tomato nucleus 68.28 69.06
PGSC0003DMT400004515 Potato nucleus 56.72 67.86
KRH58197 Soybean cytosol 68.66 66.67
KRH04340 Soybean cytosol 61.94 66.14
Os04t0590200-01 Rice cytosol 71.27 62.62
Zm00001d002495_P001 Maize cytosol, nucleus, peroxisome 69.03 59.87
EES12751 Sorghum cytosol, nucleus, peroxisome 69.4 59.62
Zm00001d026035_P001 Maize cytosol, nucleus, peroxisome 68.28 59.03
TraesCS2B01G470600.1 Wheat cytosol, nucleus, peroxisome 68.66 58.79
TraesCS2A01G449300.1 Wheat cytosol, nucleus, peroxisome 69.03 58.73
TraesCS2D01G448700.1 Wheat cytosol, nucleus, peroxisome 68.28 58.47
VIT_15s0045g01130.t01 Wine grape cytosol, plastid 53.36 58.13
KRG90376 Soybean nucleus 52.24 52.24
KRH31728 Soybean cytosol 52.24 51.85
KRH15076 Soybean nucleus 33.21 51.15
KRH57320 Soybean nucleus 53.73 50.88
KRH04051 Soybean nucleus 54.1 50.52
KRH51551 Soybean plastid 38.43 50.49
KRH73062 Soybean cytosol 42.91 50.22
KRH34516 Soybean cytosol, nucleus, peroxisome 52.61 48.62
KRH14482 Soybean cytosol, mitochondrion, peroxisome 45.15 48.59
KRH76289 Soybean nucleus 51.87 48.26
KRH28008 Soybean nucleus 52.99 47.65
KRH77431 Soybean nucleus 52.99 47.33
KRH73632 Soybean cytosol, endoplasmic reticulum, peroxisome 43.66 47.18
KRG92293 Soybean cytosol, mitochondrion, nucleus 52.61 46.53
KRH65251 Soybean nucleus 53.73 46.45
KRH31005 Soybean nucleus 48.51 44.98
KRG92616 Soybean nucleus 45.52 44.04
KRH34163 Soybean nucleus 45.9 43.93
KRG97871 Soybean nucleus 48.13 42.72
KRH62181 Soybean nucleus 41.04 39.29
KRH52892 Soybean nucleus 41.42 39.08
KRH72453 Soybean nucleus 38.43 38.01
KRH16838 Soybean nucleus 35.45 37.11
Protein Annotations
EntrezGene:100803960Gene3D:3.30.1330.80MapMan:35.1EMBL:ACUP02011489InterPro:AT-hook_nuclearEnsemblPlantsGene:GLYMA_18G247200
GO:GO:0003674GO:GO:0003676GO:GO:0003677GO:GO:0003680GO:GO:0003700GO:GO:0005488
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0006139GO:GO:0006351
GO:GO:0006355GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987UniProt:I1N437
InterPro:IPR005175EnsemblPlants:KRH00993ProteinID:KRH00993ProteinID:KRH00993.1PFAM:PF03479PIRSF:PIRSF016021
InterPro:PPC_domPFscan:PS51742PANTHER:PTHR31100PANTHER:PTHR31100:SF21SUPFAM:SSF117856UniParc:UPI000233E700
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr18:-:53457034..53458586
Molecular Weight (calculated)
27851.7 Da
IEP (calculated)
5.933
GRAVY (calculated)
-0.308
Length
268 amino acids
Sequence
(BLAST)
001: MAGIDLGSAS HFVHHRLERP DLEDDENQQD QDNNLNNHEG LDLVTPNSGP GDVVGRRPRG RPPGSKNKPK PPVIITRESA NTLRAHILEV SSGCDVFESV
101: ATYARKRQRG ICVLSGSGTV TNVTLRQPAA AGAVVTLHGR FEILSLSGSF LPPPAPPGAT SLTVFLGGGQ GQVVGGNVVG PLVASGPVIV IASSFTNVAY
201: ERLPLDEEES MQMQQGQSSA GGGGSGGGVS NNSFPDPSSG LPFFNLPLNM PQLPVDGWAG NSGGRQSY
Best Arabidopsis Sequence Match ( AT1G76500.1 )
(BLAST)
001: MDGGYDQSGG ASRYFHNLFR PELHHQLQPQ PQLHPLPQPQ PQPQPQQQNS DDESDSNKDP GSDPVTSGST GKRPRGRPPG SKNKPKPPVI VTRDSPNVLR
101: SHVLEVSSGA DIVESVTTYA RRRGRGVSIL SGNGTVANVS LRQPATTAAH GANGGTGGVV ALHGRFEILS LTGTVLPPPA PPGSGGLSIF LSGVQGQVIG
201: GNVVAPLVAS GPVILMAASF SNATFERLPL EDEGGEGGEG GEVGEGGGGE GGPPPATSSS PPSGAGQGQL RGNMSGYDQF AGDPHLLGWG AAAAAAPPRP
301: AF
Arabidopsis Description
AHL29AT-hook motif nuclear-localized protein 29 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9K7]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.