Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
KRH40225 | Soybean | nucleus | 96.64 | 95.93 |
KRH28289 | Soybean | cytosol | 67.16 | 72.0 |
KRH77205 | Soybean | nucleus | 66.42 | 71.2 |
Solyc01g080960.2.1 | Tomato | nucleus | 68.28 | 69.06 |
PGSC0003DMT400004515 | Potato | nucleus | 56.72 | 67.86 |
KRH58197 | Soybean | cytosol | 68.66 | 66.67 |
KRH04340 | Soybean | cytosol | 61.94 | 66.14 |
Os04t0590200-01 | Rice | cytosol | 71.27 | 62.62 |
Zm00001d002495_P001 | Maize | cytosol, nucleus, peroxisome | 69.03 | 59.87 |
EES12751 | Sorghum | cytosol, nucleus, peroxisome | 69.4 | 59.62 |
Zm00001d026035_P001 | Maize | cytosol, nucleus, peroxisome | 68.28 | 59.03 |
TraesCS2B01G470600.1 | Wheat | cytosol, nucleus, peroxisome | 68.66 | 58.79 |
TraesCS2A01G449300.1 | Wheat | cytosol, nucleus, peroxisome | 69.03 | 58.73 |
TraesCS2D01G448700.1 | Wheat | cytosol, nucleus, peroxisome | 68.28 | 58.47 |
VIT_15s0045g01130.t01 | Wine grape | cytosol, plastid | 53.36 | 58.13 |
KRG90376 | Soybean | nucleus | 52.24 | 52.24 |
KRH31728 | Soybean | cytosol | 52.24 | 51.85 |
KRH15076 | Soybean | nucleus | 33.21 | 51.15 |
KRH57320 | Soybean | nucleus | 53.73 | 50.88 |
KRH04051 | Soybean | nucleus | 54.1 | 50.52 |
KRH51551 | Soybean | plastid | 38.43 | 50.49 |
KRH73062 | Soybean | cytosol | 42.91 | 50.22 |
KRH34516 | Soybean | cytosol, nucleus, peroxisome | 52.61 | 48.62 |
KRH14482 | Soybean | cytosol, mitochondrion, peroxisome | 45.15 | 48.59 |
KRH76289 | Soybean | nucleus | 51.87 | 48.26 |
KRH28008 | Soybean | nucleus | 52.99 | 47.65 |
KRH77431 | Soybean | nucleus | 52.99 | 47.33 |
KRH73632 | Soybean | cytosol, endoplasmic reticulum, peroxisome | 43.66 | 47.18 |
KRG92293 | Soybean | cytosol, mitochondrion, nucleus | 52.61 | 46.53 |
KRH65251 | Soybean | nucleus | 53.73 | 46.45 |
KRH31005 | Soybean | nucleus | 48.51 | 44.98 |
KRG92616 | Soybean | nucleus | 45.52 | 44.04 |
KRH34163 | Soybean | nucleus | 45.9 | 43.93 |
KRG97871 | Soybean | nucleus | 48.13 | 42.72 |
KRH62181 | Soybean | nucleus | 41.04 | 39.29 |
KRH52892 | Soybean | nucleus | 41.42 | 39.08 |
KRH72453 | Soybean | nucleus | 38.43 | 38.01 |
KRH16838 | Soybean | nucleus | 35.45 | 37.11 |
Protein Annotations
EntrezGene:100803960 | Gene3D:3.30.1330.80 | MapMan:35.1 | EMBL:ACUP02011489 | InterPro:AT-hook_nuclear | EnsemblPlantsGene:GLYMA_18G247200 |
GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003680 | GO:GO:0003700 | GO:GO:0005488 |
GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | UniProt:I1N437 |
InterPro:IPR005175 | EnsemblPlants:KRH00993 | ProteinID:KRH00993 | ProteinID:KRH00993.1 | PFAM:PF03479 | PIRSF:PIRSF016021 |
InterPro:PPC_dom | PFscan:PS51742 | PANTHER:PTHR31100 | PANTHER:PTHR31100:SF21 | SUPFAM:SSF117856 | UniParc:UPI000233E700 |
SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr18:-:53457034..53458586
Molecular Weight (calculated)
27851.7 Da
IEP (calculated)
5.933
GRAVY (calculated)
-0.308
Length
268 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGIDLGSAS HFVHHRLERP DLEDDENQQD QDNNLNNHEG LDLVTPNSGP GDVVGRRPRG RPPGSKNKPK PPVIITRESA NTLRAHILEV SSGCDVFESV
101: ATYARKRQRG ICVLSGSGTV TNVTLRQPAA AGAVVTLHGR FEILSLSGSF LPPPAPPGAT SLTVFLGGGQ GQVVGGNVVG PLVASGPVIV IASSFTNVAY
201: ERLPLDEEES MQMQQGQSSA GGGGSGGGVS NNSFPDPSSG LPFFNLPLNM PQLPVDGWAG NSGGRQSY
101: ATYARKRQRG ICVLSGSGTV TNVTLRQPAA AGAVVTLHGR FEILSLSGSF LPPPAPPGAT SLTVFLGGGQ GQVVGGNVVG PLVASGPVIV IASSFTNVAY
201: ERLPLDEEES MQMQQGQSSA GGGGSGGGVS NNSFPDPSSG LPFFNLPLNM PQLPVDGWAG NSGGRQSY
001: MDGGYDQSGG ASRYFHNLFR PELHHQLQPQ PQLHPLPQPQ PQPQPQQQNS DDESDSNKDP GSDPVTSGST GKRPRGRPPG SKNKPKPPVI VTRDSPNVLR
101: SHVLEVSSGA DIVESVTTYA RRRGRGVSIL SGNGTVANVS LRQPATTAAH GANGGTGGVV ALHGRFEILS LTGTVLPPPA PPGSGGLSIF LSGVQGQVIG
201: GNVVAPLVAS GPVILMAASF SNATFERLPL EDEGGEGGEG GEVGEGGGGE GGPPPATSSS PPSGAGQGQL RGNMSGYDQF AGDPHLLGWG AAAAAAPPRP
301: AF
101: SHVLEVSSGA DIVESVTTYA RRRGRGVSIL SGNGTVANVS LRQPATTAAH GANGGTGGVV ALHGRFEILS LTGTVLPPPA PPGSGGLSIF LSGVQGQVIG
201: GNVVAPLVAS GPVILMAASF SNATFERLPL EDEGGEGGEG GEVGEGGGGE GGPPPATSSS PPSGAGQGQL RGNMSGYDQF AGDPHLLGWG AAAAAAPPRP
301: AF
Arabidopsis Description
AHL29AT-hook motif nuclear-localized protein 29 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9K7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.