CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 5
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc04g082810.2.1	Tomato	cytosol, nucleus, peroxisome	61.76	51.43
PGSC0003DMT400025705	Potato	plastid	63.24	49.62
CDY20404	Canola	nucleus	59.8	45.02
CDX87591	Canola	nucleus	60.29	43.93
CDY45983	Canola	nucleus	61.27	43.4
Bra008262.1-P	Field mustard	nucleus	60.29	42.86
Bra015738.1-P	Field mustard	nucleus	60.29	42.71
KRH77205	Soybean	nucleus	51.47	42.0
KRH28289	Soybean	cytosol	50.98	41.6
Bra003717.1-P	Field mustard	nucleus	58.33	41.46
KRG90376	Soybean	nucleus	54.41	41.42
CDX96613	Canola	nucleus	60.78	41.2
KRH31728	Soybean	cytosol	54.41	41.11
AT1G76500.1	Thale cress	nucleus	60.78	41.06
CDX88286	Canola	cytosol, endoplasmic reticulum, nucleus	55.39	40.94
KRH73062	Soybean	cytosol	45.59	40.61
Bra012256.1-P	Field mustard	nucleus	61.27	40.45
AT1G20900.1	Thale cress	nucleus	60.78	39.87
Bra016444.1-P	Field mustard	nucleus	61.27	39.68
CDX68095	Canola	cytosol	52.45	39.63
GSMUA_Achr9P12320_001	Banana	plastid	54.41	39.5
CDY33658	Canola	nucleus	56.37	39.38
KRH14482	Soybean	cytosol, mitochondrion, peroxisome	48.04	39.36
KRH73632	Soybean	cytosol, endoplasmic reticulum, peroxisome	47.55	39.11
CDX85952	Canola	cytosol	51.47	38.6
KRH15076	Soybean	nucleus	32.84	38.51
KRH00993	Soybean	nucleus	50.49	38.43
KRH76289	Soybean	nucleus	53.43	37.85
CDY31511	Canola	nucleus	49.51	37.55
KRH40225	Soybean	nucleus	49.51	37.41
CDY31858	Canola	nucleus	50.0	37.36
CDY01347	Canola	nucleus	49.51	37.13
KRH34516	Soybean	cytosol, nucleus, peroxisome	52.45	36.9
KRH57320	Soybean	nucleus	50.98	36.75
KRH04340	Soybean	cytosol	45.1	36.65
Zm00001d017825_P001	Maize	plastid	57.84	36.42
TraesCS6A01G277700.1	Wheat	plastid	58.33	36.39
Zm00001d051620_P001	Maize	plastid	56.37	36.28
KRH04051	Soybean	nucleus	50.98	36.24
CDY29494	Canola	nucleus	48.53	36.13
Bra025854.1-P	Field mustard	nucleus	50.49	36.01
EES05630	Sorghum	cytosol, mitochondrion, nucleus, plastid	57.84	35.98
KRH58197	Soybean	cytosol	48.53	35.87
TraesCS6D01G258400.1	Wheat	plastid	57.84	35.87
TraesCS6B01G306100.1	Wheat	plastid	57.84	35.87
VIT_18s0122g00590.t01	Wine grape	endoplasmic reticulum, plasma membrane	55.39	35.76
HORVU6Hr1G070090.1	Barley	plastid	57.84	35.65
KRH31005	Soybean	nucleus	50.49	35.64
KRG92293	Soybean	cytosol, mitochondrion, nucleus	52.45	35.31
Zm00001d045928_P001	Maize	nucleus	52.45	34.97
KRH28008	Soybean	nucleus	50.98	34.9
Os02t0713700-01	Rice	cytosol, mitochondrion, nucleus, plastid	57.35	34.82
HORVU7Hr1G046930.1	Barley	cytosol, nucleus, peroxisome	53.92	34.81
KRH77431	Soybean	nucleus	50.98	34.67
KRG92616	Soybean	nucleus	47.06	34.66
KRH34163	Soybean	nucleus	47.55	34.64
Zm00001d046696_P001	Maize	cytosol, nucleus, peroxisome	45.59	34.32
KXG19929	Sorghum	nucleus	53.43	34.28
KRG97871	Soybean	nucleus	50.49	34.11
KRH65251	Soybean	nucleus	51.47	33.87
TraesCS7B01G193900.1	Wheat	cytosol, nucleus, peroxisome	53.43	33.85
EER88668	Sorghum	cytosol	44.61	33.7
TraesCS7D01G228800.1	Wheat	nucleus	52.45	33.65
TraesCS7A01G225700.1	Wheat	nucleus	52.94	33.44
Os06t0326900-01	Rice	nucleus	51.96	32.92
TraesCS7A01G395400.1	Wheat	cytosol	46.08	32.53
TraesCS7B01G297300.1	Wheat	cytosol	46.08	32.19
HORVU7Hr1G093230.2	Barley	cytosol	46.57	31.35
KRH16838	Soybean	nucleus	35.78	28.52
KRH72453	Soybean	nucleus	37.75	28.41
KRH62181	Soybean	nucleus	38.73	28.21
KRH52892	Soybean	nucleus	39.22	28.17

Protein Annotations

Gene3D:3.30.1330.80	MapMan:35.1	UniProt:A0A0R0JK33	EMBL:ACUP02003380	InterPro:AT-hook_nuclear	EnsemblPlantsGene:GLYMA_06G014100
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003680	GO:GO:0003700	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR005175
EnsemblPlants:KRH51551	ProteinID:KRH51551	ProteinID:KRH51551.1	PFAM:PF03479	PIRSF:PIRSF016021	InterPro:PPC_dom
PFscan:PS51742	PANTHER:PTHR31100	PANTHER:PTHR31100:SF43	SUPFAM:SSF117856	UniParc:UPI0006EE0890	SEG:seg

Description

hypothetical protein

Coordinates

chr6:+:1072128..1072901

Molecular Weight (calculated)

21106.1 Da

IEP (calculated)

7.904

GRAVY (calculated)

-0.035

Length

204 amino acids

Sequence
(BLAST)

001: MGSKNKPKPP VIVTRDSPNV LRSHVLEVSS GADVVESLSN YARRRGRGVS VLSGSGTVAN VVLRQPAGSV LTLHGRFEIV SMTGTVLPPP APPGSDGLSV
101: YLSGAQGQVV GGVVVAPLVA SSHVVLVAAS FANAMFERLP LPLNQHDDDD QVLQEAPRGV MGTEQVADGR NYPFSASLQG EVFGWGGTGT TSSTSTAPPK
201: THPF

Best Arabidopsis Sequence Match ( AT1G76500.1 )
(BLAST)

001: MDGGYDQSGG ASRYFHNLFR PELHHQLQPQ PQLHPLPQPQ PQPQPQQQNS DDESDSNKDP GSDPVTSGST GKRPRGRPPG SKNKPKPPVI VTRDSPNVLR
101: SHVLEVSSGA DIVESVTTYA RRRGRGVSIL SGNGTVANVS LRQPATTAAH GANGGTGGVV ALHGRFEILS LTGTVLPPPA PPGSGGLSIF LSGVQGQVIG
201: GNVVAPLVAS GPVILMAASF SNATFERLPL EDEGGEGGEG GEVGEGGGGE GGPPPATSSS PPSGAGQGQL RGNMSGYDQF AGDPHLLGWG AAAAAAPPRP
301: AF

Arabidopsis Description

AHL29AT-hook motif nuclear-localized protein 29 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9K7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.