Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 1
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d045928_P001 | Maize | nucleus | 88.99 | 92.48 |
| EES05630 | Sorghum | cytosol, mitochondrion, nucleus, plastid | 69.18 | 67.07 |
| Os06t0326900-01 | Rice | nucleus | 67.61 | 66.77 |
| GSMUA_Achr9P12320_001 | Banana | plastid | 57.55 | 65.12 |
| TraesCS7B01G193900.1 | Wheat | cytosol, nucleus, peroxisome | 65.41 | 64.6 |
| HORVU7Hr1G046930.1 | Barley | cytosol, nucleus, peroxisome | 64.15 | 64.56 |
| TraesCS7A01G225700.1 | Wheat | nucleus | 65.41 | 64.4 |
| TraesCS7D01G228800.1 | Wheat | nucleus | 64.15 | 64.15 |
| Solyc04g082810.2.1 | Tomato | cytosol, nucleus, peroxisome | 44.34 | 57.55 |
| PGSC0003DMT400025705 | Potato | plastid | 45.6 | 55.77 |
| KRH51551 | Soybean | plastid | 34.28 | 53.43 |
| CDX87591 | Canola | nucleus | 45.91 | 52.14 |
| Bra015738.1-P | Field mustard | nucleus | 45.6 | 50.35 |
| CDX88286 | Canola | cytosol, endoplasmic reticulum, nucleus | 43.4 | 50.0 |
| CDY20404 | Canola | nucleus | 42.45 | 49.82 |
| CDY45983 | Canola | nucleus | 44.03 | 48.61 |
| CDX96613 | Canola | nucleus | 45.91 | 48.51 |
| Bra008262.1-P | Field mustard | nucleus | 43.4 | 48.08 |
| CDY31511 | Canola | nucleus | 40.57 | 47.96 |
| KXG25365 | Sorghum | nucleus | 40.57 | 47.78 |
| AT1G20900.1 | Thale cress | nucleus | 46.54 | 47.59 |
| Bra012256.1-P | Field mustard | nucleus | 46.23 | 47.57 |
| CDY01347 | Canola | nucleus | 40.25 | 47.06 |
| CDY33658 | Canola | nucleus | 43.08 | 46.92 |
| Bra003717.1-P | Field mustard | nucleus | 42.14 | 46.69 |
| CDY31858 | Canola | nucleus | 39.94 | 46.52 |
| CDY29494 | Canola | nucleus | 39.94 | 46.35 |
| Bra016444.1-P | Field mustard | nucleus | 45.91 | 46.35 |
| AT1G76500.1 | Thale cress | nucleus | 43.71 | 46.03 |
| CDX68095 | Canola | cytosol | 38.99 | 45.93 |
| Bra025854.1-P | Field mustard | nucleus | 40.88 | 45.45 |
| EER95114 | Sorghum | nucleus | 38.36 | 44.85 |
| CDX85952 | Canola | cytosol | 38.05 | 44.49 |
| EER88668 | Sorghum | cytosol | 37.74 | 44.44 |
| EES12751 | Sorghum | cytosol, nucleus, peroxisome | 43.4 | 44.23 |
| VIT_18s0122g00590.t01 | Wine grape | endoplasmic reticulum, plasma membrane | 43.71 | 43.99 |
| KXG24494 | Sorghum | nucleus | 39.31 | 41.95 |
| OQU85972 | Sorghum | cytosol | 38.05 | 40.74 |
| EES04848 | Sorghum | nucleus | 40.57 | 39.45 |
| OQU88209 | Sorghum | peroxisome | 28.3 | 36.0 |
| EER89149 | Sorghum | cytosol, nucleus, plastid | 37.42 | 34.1 |
| EER99980 | Sorghum | plastid | 22.33 | 33.65 |
| KXG25333 | Sorghum | cytosol | 28.93 | 27.63 |
| OQU89633 | Sorghum | cytosol | 29.56 | 26.55 |
Protein Annotations
| Gene3D:3.30.1330.80 | MapMan:35.1 | UniProt:A0A194YIX9 | InterPro:AT-hook_nuclear | ncoils:Coil | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003680 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR005175 | ProteinID:KXG19927.1 |
| EnsemblPlants:KXG19929 | ProteinID:KXG19929 | ProteinID:KXG19929.1 | PFAM:PF03479 | PIRSF:PIRSF016021 | InterPro:PPC_dom |
| PFscan:PS51742 | PANTHER:PTHR31100 | PANTHER:PTHR31100:SF5 | EnsemblPlantsGene:SORBI_3010G134900 | SUPFAM:SSF117856 | UniParc:UPI0007F247CF |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr10:-:19938253..19940083
Molecular Weight (calculated)
31873.6 Da
IEP (calculated)
5.344
GRAVY (calculated)
-0.230
Length
318 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGMDPGGGG GTASHYLELL RAQQLQHQQP SAPLSPSSHV KMERSAPSPE NVDPGGDQPA LEGSGGSGGP MRKPRGRPPG SKNKPKPPII ITRDSPNALH
101: SHVLEVAAGA DIVECVSEYA RRRCRGVCVL SGGGAVSNLA LRQPGAEPPG SLVATLRGQF EILSLTGTVL PPPAPPGASS LSVYVAGGQG QVMGGSVVGQ
201: LIAAGPVVLM AASFANAVYE RLPLEAEEEE AATAAAAAAA ATETQGAAEP AEGQPQQQEA SQSSGVTGGD GGGGGIGHGM SLYDLGGNAA GYQLPGENFG
301: TWSGEKLLNP AFRLKATL
101: SHVLEVAAGA DIVECVSEYA RRRCRGVCVL SGGGAVSNLA LRQPGAEPPG SLVATLRGQF EILSLTGTVL PPPAPPGASS LSVYVAGGQG QVMGGSVVGQ
201: LIAAGPVVLM AASFANAVYE RLPLEAEEEE AATAAAAAAA ATETQGAAEP AEGQPQQQEA SQSSGVTGGD GGGGGIGHGM SLYDLGGNAA GYQLPGENFG
301: TWSGEKLLNP AFRLKATL
001: MDGGYDQSGG ASRYFHNLFR PELHHQLQPQ PQLHPLPQPQ PQPQPQQQNS DDESDSNKDP GSDPVTSGST GKRPRGRPPG SKNKPKPPVI VTRDSPNVLR
101: SHVLEVSSGA DIVESVTTYA RRRGRGVSIL SGNGTVANVS LRQPATTAAH GANGGTGGVV ALHGRFEILS LTGTVLPPPA PPGSGGLSIF LSGVQGQVIG
201: GNVVAPLVAS GPVILMAASF SNATFERLPL EDEGGEGGEG GEVGEGGGGE GGPPPATSSS PPSGAGQGQL RGNMSGYDQF AGDPHLLGWG AAAAAAPPRP
301: AF
101: SHVLEVSSGA DIVESVTTYA RRRGRGVSIL SGNGTVANVS LRQPATTAAH GANGGTGGVV ALHGRFEILS LTGTVLPPPA PPGSGGLSIF LSGVQGQVIG
201: GNVVAPLVAS GPVILMAASF SNATFERLPL EDEGGEGGEG GEVGEGGGGE GGPPPATSSS PPSGAGQGQL RGNMSGYDQF AGDPHLLGWG AAAAAAPPRP
301: AF
Arabidopsis Description
AHL29AT-hook motif nuclear-localized protein 29 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9K7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.