Subcellular Localization
min:
: max
Winner_takes_all: cytosol, nucleus, peroxisome
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G225700.1 | Wheat | nucleus | 90.19 | 88.24 |
| TraesCS7D01G228800.1 | Wheat | nucleus | 87.03 | 86.48 |
| TraesCS7B01G193900.1 | Wheat | cytosol, nucleus, peroxisome | 87.97 | 86.34 |
| Zm00001d045928_P001 | Maize | nucleus | 62.66 | 64.71 |
| Os06t0326900-01 | Rice | nucleus | 65.51 | 64.29 |
| KXG19929 | Sorghum | nucleus | 64.56 | 64.15 |
| GSMUA_Achr9P12320_001 | Banana | plastid | 55.38 | 62.28 |
| HORVU6Hr1G070090.1 | Barley | plastid | 65.19 | 62.24 |
| Solyc04g082810.2.1 | Tomato | cytosol, nucleus, peroxisome | 42.72 | 55.1 |
| PGSC0003DMT400025705 | Potato | plastid | 44.62 | 54.23 |
| KRH51551 | Soybean | plastid | 34.81 | 53.92 |
| CDY20404 | Canola | nucleus | 40.82 | 47.6 |
| CDX87591 | Canola | nucleus | 41.77 | 47.14 |
| CDX88286 | Canola | cytosol, endoplasmic reticulum, nucleus | 41.14 | 47.1 |
| CDX96613 | Canola | nucleus | 44.62 | 46.84 |
| CDY45983 | Canola | nucleus | 42.41 | 46.53 |
| Bra012256.1-P | Field mustard | nucleus | 45.25 | 46.28 |
| Bra015738.1-P | Field mustard | nucleus | 42.09 | 46.18 |
| Bra008262.1-P | Field mustard | nucleus | 41.77 | 45.99 |
| AT1G20900.1 | Thale cress | nucleus | 44.94 | 45.66 |
| CDY33658 | Canola | nucleus | 42.09 | 45.55 |
| Bra016444.1-P | Field mustard | nucleus | 45.25 | 45.4 |
| CDY31511 | Canola | nucleus | 38.61 | 45.35 |
| HORVU4Hr1G060280.1 | Barley | cytosol, nucleus, plastid | 36.08 | 44.53 |
| CDY01347 | Canola | nucleus | 38.29 | 44.49 |
| HORVU7Hr1G020390.1 | Barley | mitochondrion | 26.58 | 44.44 |
| CDY29494 | Canola | nucleus | 38.29 | 44.16 |
| HORVU6Hr1G010470.2 | Barley | cytosol, nucleus, peroxisome | 39.24 | 44.13 |
| HORVU7Hr1G070490.2 | Barley | cytosol, mitochondrion, peroxisome | 40.19 | 44.1 |
| AT1G76500.1 | Thale cress | nucleus | 42.09 | 44.04 |
| CDY31858 | Canola | nucleus | 37.97 | 43.96 |
| HORVU4Hr1G000870.2 | Barley | nucleus | 39.87 | 43.9 |
| HORVU6Hr1G091740.1 | Barley | cytosol | 40.19 | 43.49 |
| Bra003717.1-P | Field mustard | nucleus | 39.24 | 43.21 |
| VIT_18s0122g00590.t01 | Wine grape | endoplasmic reticulum, plasma membrane | 43.04 | 43.04 |
| Bra025854.1-P | Field mustard | nucleus | 38.92 | 43.01 |
| CDX68095 | Canola | cytosol | 36.39 | 42.59 |
| HORVU6Hr1G037630.1 | Barley | nucleus | 41.46 | 42.39 |
| HORVU6Hr1G037640.1 | Barley | nucleus | 41.46 | 42.39 |
| CDX85952 | Canola | cytosol | 35.44 | 41.18 |
| HORVU1Hr1G008650.1 | Barley | mitochondrion, nucleus, peroxisome | 41.14 | 40.37 |
| HORVU4Hr1G015750.1 | Barley | mitochondrion | 35.44 | 40.29 |
| HORVU7Hr1G093230.2 | Barley | cytosol | 38.29 | 39.93 |
| HORVU7Hr1G017700.2 | Barley | nucleus | 42.72 | 38.68 |
| HORVU3Hr1G033710.2 | Barley | plastid | 25.32 | 37.56 |
| HORVU0Hr1G011700.1 | Barley | cytosol | 21.2 | 31.02 |
| HORVU3Hr1G108820.1 | Barley | mitochondrion | 23.1 | 28.52 |
Protein Annotations
| Gene3D:3.30.1330.80 | MapMan:35.1 | InterPro:AT-hook_nuclear | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003680 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:HORVU7Hr1G046930 | EnsemblPlants:HORVU7Hr1G046930.1 | InterPro:IPR005175 | UniProt:M0Y648 |
| PFAM:PF03479 | PIRSF:PIRSF016021 | InterPro:PPC_dom | PFscan:PS51742 | PANTHER:PTHR31100 | PANTHER:PTHR31100:SF5 |
| SUPFAM:SSF117856 | UniParc:UPI00029691AC | SEG:seg | : | : | : |
Description
AT-hook motif nuclear-localized protein [Source:UniProtKB/TrEMBL;Acc:M0Y648]
Coordinates
chrchr7H:+:155479874..155481410
Molecular Weight (calculated)
31792.4 Da
IEP (calculated)
6.023
GRAVY (calculated)
-0.225
Length
316 amino acids
Sequence
(BLAST)
(BLAST)
001: MARMDPGAGE PRGASHYLDL LLAQQQQTTP FSPSAHVKAE QHSMASPDRS TGAEQRGGGG DPQQPASTAM VLADGGEGPA RPMRRPRGRP RGSKNKPKPP
101: IIVTRDSPNA FHSHILEVAD GADVVQCLAE YARRRGRGVC VLSGAGVVAD VSLRQPGASS AGGLVATLQG QFEILSLSGT VLPPPAPPGA SSLAVYLAGW
201: QGQVVGGSVV GQLVAAGPVF LMAASFANAV YERLPLEGEA EEAGTATAAT EAQGGGAAAQ SPCTLPQQPA ASQSSEVTGG EAGGLGAPLC NLEGNAGSYQ
301: LPGPGDNLGS WSGVRP
101: IIVTRDSPNA FHSHILEVAD GADVVQCLAE YARRRGRGVC VLSGAGVVAD VSLRQPGASS AGGLVATLQG QFEILSLSGT VLPPPAPPGA SSLAVYLAGW
201: QGQVVGGSVV GQLVAAGPVF LMAASFANAV YERLPLEGEA EEAGTATAAT EAQGGGAAAQ SPCTLPQQPA ASQSSEVTGG EAGGLGAPLC NLEGNAGSYQ
301: LPGPGDNLGS WSGVRP
001: MDGGYDQSGG ASRYFHNLFR PELHHQLQPQ PQLHPLPQPQ PQPQPQQQNS DDESDSNKDP GSDPVTSGST GKRPRGRPPG SKNKPKPPVI VTRDSPNVLR
101: SHVLEVSSGA DIVESVTTYA RRRGRGVSIL SGNGTVANVS LRQPATTAAH GANGGTGGVV ALHGRFEILS LTGTVLPPPA PPGSGGLSIF LSGVQGQVIG
201: GNVVAPLVAS GPVILMAASF SNATFERLPL EDEGGEGGEG GEVGEGGGGE GGPPPATSSS PPSGAGQGQL RGNMSGYDQF AGDPHLLGWG AAAAAAPPRP
301: AF
101: SHVLEVSSGA DIVESVTTYA RRRGRGVSIL SGNGTVANVS LRQPATTAAH GANGGTGGVV ALHGRFEILS LTGTVLPPPA PPGSGGLSIF LSGVQGQVIG
201: GNVVAPLVAS GPVILMAASF SNATFERLPL EDEGGEGGEG GEVGEGGGGE GGPPPATSSS PPSGAGQGQL RGNMSGYDQF AGDPHLLGWG AAAAAAPPRP
301: AF
Arabidopsis Description
AHL29AT-hook motif nuclear-localized protein 29 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9K7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.