Factsheet for Zm00001d045928_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
cytosol 1
mitochondrion 2
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG19929	Sorghum	nucleus	92.48	88.99
Zm00001d017825_P001	Maize	plastid	69.93	66.05
Zm00001d051620_P001	Maize	plastid	67.97	65.62
Os06t0326900-01	Rice	nucleus	68.95	65.53
GSMUA_Achr9P12320_001	Banana	plastid	57.84	62.99
HORVU7Hr1G046930.1	Barley	cytosol, nucleus, peroxisome	64.71	62.66
TraesCS7A01G225700.1	Wheat	nucleus	65.69	62.23
TraesCS7B01G193900.1	Wheat	cytosol, nucleus, peroxisome	65.36	62.11
TraesCS7D01G228800.1	Wheat	nucleus	64.38	61.95
Solyc04g082810.2.1	Tomato	cytosol, nucleus, peroxisome	45.1	56.33
PGSC0003DMT400025705	Potato	plastid	46.41	54.62
KRH51551	Soybean	plastid	34.97	52.45
CDX87591	Canola	nucleus	45.42	49.64
Bra015738.1-P	Field mustard	nucleus	45.1	47.92
CDX96613	Canola	nucleus	47.06	47.84
CDX88286	Canola	cytosol, endoplasmic reticulum, nucleus	43.14	47.83
CDY20404	Canola	nucleus	42.16	47.6
CDY31511	Canola	nucleus	41.83	47.58
AT1G20900.1	Thale cress	nucleus	47.39	46.62
Bra012256.1-P	Field mustard	nucleus	47.06	46.6
Zm00001d018508_P001	Maize	cytosol	37.25	46.53
CDY45983	Canola	nucleus	43.79	46.53
CDY01347	Canola	nucleus	41.18	46.32
Bra008262.1-P	Field mustard	nucleus	43.14	45.99
CDY29494	Canola	nucleus	41.18	45.99
CDY33658	Canola	nucleus	43.79	45.89
CDY31858	Canola	nucleus	40.85	45.79
Bra016444.1-P	Field mustard	nucleus	47.06	45.71
Zm00001d049906_P001	Maize	nucleus	39.54	45.66
Bra025854.1-P	Field mustard	nucleus	42.16	45.1
Bra003717.1-P	Field mustard	nucleus	42.16	44.95
Zm00001d046696_P001	Maize	cytosol, nucleus, peroxisome	39.54	44.65
CDX68095	Canola	cytosol	38.89	44.07
Zm00001d031887_P001	Maize	nucleus	38.56	43.87
AT1G76500.1	Thale cress	nucleus	42.81	43.38
Zm00001d002495_P001	Maize	cytosol, nucleus, peroxisome	43.14	42.72
CDX85952	Canola	cytosol	37.58	42.28
Zm00001d024537_P001	Maize	cytosol, endoplasmic reticulum, nucleus	40.2	42.27
Zm00001d026035_P001	Maize	cytosol, nucleus, peroxisome	42.81	42.26
VIT_18s0122g00590.t01	Wine grape	endoplasmic reticulum, plasma membrane	43.46	42.09
Zm00001d028577_P001	Maize	nucleus	37.25	41.76
Zm00001d039249_P001	Maize	cytosol	20.59	40.65
Zm00001d049521_P001	Maize	cytosol, endoplasmic reticulum, peroxisome	39.54	40.47
Zm00001d016132_P001	Maize	nucleus	40.85	40.45
Zm00001d053429_P001	Maize	nucleus	41.18	39.38
Zm00001d036088_P001	Maize	extracellular	33.99	37.14
Zm00001d045427_P001	Maize	cytosol, nucleus, plasma membrane	40.85	36.66
Zm00001d009031_P001	Maize	mitochondrion, plastid	23.2	34.98
Zm00001d042060_P001	Maize	plastid	27.78	34.69
Zm00001d020768_P001	Maize	cytosol	30.39	27.93
Zm00001d031826_P001	Maize	cytosol, endoplasmic reticulum, nucleus	26.47	27.55
Zm00001d005923_P001	Maize	nucleus	29.74	26.45

Protein Annotations

Gene3D:3.30.1330.80	MapMan:35.1	UniProt:A0A1D6NZW1	ProteinID:AQL03439.1	InterPro:AT-hook_nuclear	ncoils:Coil
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003680	GO:GO:0003700	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR005175
PFAM:PF03479	PIRSF:PIRSF016021	InterPro:PPC_dom	PFscan:PS51742	PANTHER:PTHR31100	PANTHER:PTHR31100:SF5
SUPFAM:SSF117856	UniParc:UPI0008433A2B	EnsemblPlantsGene:Zm00001d045928	EnsemblPlants:Zm00001d045928_P001	EnsemblPlants:Zm00001d045928_T001	SEG:seg

Description

AT-hook motif nuclear-localized protein 29

Coordinates

chr9:+:47542843..47543763

Molecular Weight (calculated)

30831.2 Da

IEP (calculated)

4.838

GRAVY (calculated)

-0.245

Length

306 amino acids

Sequence
(BLAST)

001: MDPGGGGGAA SHYLELLRAQ QQQLLQQHQQ APLSPSSHVK MERSAPSPEN VDPGGDQPAS EGSGGSGGPT RKPRGRPLGS KNKPKPPIII TRDSPNALHS
101: HLLEVAAGAD IVECVSEYAR RRCRGVCVLS GGGAVSNLAL RQPGADPPGS LLATLRGQFE ILSLTGTVLP PPAPPGASNL SVYVAGGQGQ VMGGSVAGQL
201: IAAGPVVLMA ASFANAVYER LPLEEEEEEA ATAAAAAAAV TETQGAAVEP AEGQQQEASQ SSGVTGGDVG GIGHGMSLYD LGGNAAGYEL PGENFGTWSG
301: GIRPPF

Best Arabidopsis Sequence Match ( AT2G45430.1 )
(BLAST)

001: MDQVSRSLPP PFLSRDLHLH PHHQFQHQQQ QQQQNHGHDI DQHRIGGLKR DRDADIDPNE HSSAGKDQST PGSGGESGGG GGGDNHITRR PRGRPAGSKN
101: KPKPPIIITR DSANALKSHV MEVANGCDVM ESVTVFARRR QRGICVLSGN GAVTNVTIRQ PASVPGGGSS VVNLHGRFEI LSLSGSFLPP PAPPAASGLT
201: IYLAGGQGQV VGGSVVGPLM ASGPVVIMAA SFGNAAYERL PLEEDDQEEQ TAGAVANNID GNATMGGGTQ TQTQTQQQQQ QQLMQDPTSF IQGLPPNLMN
301: SVQLPAEAYW GTPRPSF

Arabidopsis Description

AHL22AT-hook motif nuclear-localized protein [Source:UniProtKB/TrEMBL;Acc:A0A178VXD2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.