Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- endoplasmic reticulum 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG25333 | Sorghum | cytosol | 79.93 | 70.57 |
| GSMUA_Achr7P19000_001 | Banana | cytosol, plasma membrane, plastid | 33.67 | 53.23 |
| Os08t0478466-01 | Rice | nucleus | 57.48 | 52.16 |
| GSMUA_Achr8P23410_001 | Banana | cytosol | 32.99 | 47.32 |
| Zm00001d020768_P001 | Maize | cytosol | 48.98 | 43.24 |
| Zm00001d005923_P001 | Maize | nucleus | 50.0 | 42.73 |
| GSMUA_Achr3P06770_001 | Banana | cytosol | 32.99 | 42.73 |
| GSMUA_Achr10P... | Banana | nucleus | 39.46 | 41.58 |
| Zm00001d039249_P001 | Maize | cytosol | 20.41 | 38.71 |
| AT1G14490.2 | Thale cress | plastid | 29.25 | 38.22 |
| Zm00001d018508_P001 | Maize | cytosol | 31.29 | 37.55 |
| GSMUA_AchrUn_... | Banana | nucleus | 41.84 | 36.72 |
| Zm00001d049906_P001 | Maize | nucleus | 32.99 | 36.6 |
| Zm00001d031887_P001 | Maize | nucleus | 33.33 | 36.43 |
| CDY45266 | Canola | plastid | 25.17 | 36.1 |
| Bra026211.1-P | Field mustard | plastid | 25.17 | 36.1 |
| CDY21451 | Canola | cytosol | 29.93 | 35.92 |
| CDX83182 | Canola | cytosol | 29.93 | 35.92 |
| VIT_18s0001g07380.t01 | Wine grape | nucleus | 28.57 | 34.29 |
| KRH72453 | Soybean | nucleus | 31.29 | 33.95 |
| KRH62181 | Soybean | nucleus | 32.31 | 33.93 |
| Bra000593.1-P | Field mustard | cytosol | 30.27 | 33.84 |
| KRH52892 | Soybean | nucleus | 32.65 | 33.8 |
| KRH16838 | Soybean | nucleus | 28.91 | 33.2 |
| Zm00001d042060_P001 | Maize | plastid | 27.55 | 33.06 |
| AT5G49700.1 | Thale cress | nucleus | 30.95 | 32.97 |
| PGSC0003DMT400024250 | Potato | cytosol, plastid | 29.93 | 32.71 |
| Zm00001d009031_P001 | Maize | mitochondrion, plastid | 22.11 | 32.02 |
| Zm00001d024537_P001 | Maize | cytosol, endoplasmic reticulum, nucleus | 31.63 | 31.96 |
| Zm00001d028577_P001 | Maize | nucleus | 29.59 | 31.87 |
| Zm00001d051620_P001 | Maize | plastid | 33.67 | 31.23 |
| Zm00001d049521_P001 | Maize | cytosol, endoplasmic reticulum, peroxisome | 31.63 | 31.1 |
| Zm00001d036088_P001 | Maize | extracellular | 28.91 | 30.36 |
| Zm00001d046696_P001 | Maize | cytosol, nucleus, peroxisome | 27.89 | 30.26 |
| Zm00001d002495_P001 | Maize | cytosol, nucleus, peroxisome | 31.29 | 29.77 |
| Zm00001d017825_P001 | Maize | plastid | 32.65 | 29.63 |
| Solyc12g087950.1.1 | Tomato | nucleus | 26.53 | 29.32 |
| Solyc04g076220.2.1 | Tomato | nucleus | 33.33 | 29.17 |
| PGSC0003DMT400005182 | Potato | nucleus | 26.53 | 29.1 |
| Zm00001d026035_P001 | Maize | cytosol, nucleus, peroxisome | 30.27 | 28.71 |
| CDY65376 | Canola | nucleus | 26.53 | 28.36 |
| Zm00001d016132_P001 | Maize | nucleus | 29.59 | 28.16 |
| Zm00001d053429_P001 | Maize | nucleus | 29.93 | 27.5 |
| Zm00001d045427_P001 | Maize | cytosol, nucleus, plasma membrane | 31.63 | 27.27 |
| Zm00001d045928_P001 | Maize | nucleus | 27.55 | 26.47 |
Protein Annotations
| EnsemblPlants:Zm00001d031826_P001 | EnsemblPlants:Zm00001d031826_T001 | EnsemblPlantsGene:Zm00001d031826 | EntrezGene:103643159 | Gene3D:3.30.1330.80 | InterPro:IPR005175 |
| InterPro:PPC_dom | PANTHER:PTHR31100 | PANTHER:PTHR31100:SF1 | PFAM:PF03479 | PFscan:PS51742 | ProteinID:ONM03728.1 |
| SEG:seg | SUPFAM:SSF117856 | TMHMM:TMhelix | UniParc:UPI000221EE9B | UniProt:A0A1D6KLG1 | MapMan:35.1 |
Description
AT-hook motif nuclear-localized protein 17
Coordinates
chr1:-:203010395..203011279
Molecular Weight (calculated)
29859.0 Da
IEP (calculated)
9.605
GRAVY (calculated)
-0.272
Length
294 amino acids
Sequence
(BLAST)
(BLAST)
001: MDREGHYGGR GGGRLLECFS DEVSSGNGGG EERANDGGGP RPPAPGSGVV GAWKRRRGRP PGSKNKPKPQ AAAAAAAVAR DVEPASSAMR PHVLEVPSGG
101: DVARALAGFA RRRGLGICVL AGTGAVADVS LRHPSSSADG AGGSAAVFRG RYEILSISAT FLAPSTPAAV ARATVRDLSV SLAGPHGQVV GGAVVGPLVA
201: ATAVVVLAAA FTDLTFHRLP LEDDAPASVS DIAGADERRG HGRHQYPEQH DAGGSSHPQA MAPATQPVPL FARESHELWP AAPASAQRPR SPYQ
101: DVARALAGFA RRRGLGICVL AGTGAVADVS LRHPSSSADG AGGSAAVFRG RYEILSISAT FLAPSTPAAV ARATVRDLSV SLAGPHGQVV GGAVVGPLVA
201: ATAVVVLAAA FTDLTFHRLP LEDDAPASVS DIAGADERRG HGRHQYPEQH DAGGSSHPQA MAPATQPVPL FARESHELWP AAPASAQRPR SPYQ
001: MKGEYREQKS NEMFSKLPHH QQQQQQQQQQ HSLTSHFHLS STVTPTVDDS SIEVVRRPRG RPPGSKNKPK PPVFVTRDTD PPMSPYILEV PSGNDVVEAI
101: NRFCRRKSIG VCVLSGSGSV ANVTLRQPSP AALGSTITFH GKFDLLSVSA TFLPPPPRTS LSPPVSNFFT VSLAGPQGQI IGGFVAGPLI SAGTVYVIAA
201: SFNNPSYHRL PAEEEQKHSA GTGEREGQSP PVSGGGEESG QMAGSGGESC GVSMYSCHMG GSDVIWAPTA RAPPPY
101: NRFCRRKSIG VCVLSGSGSV ANVTLRQPSP AALGSTITFH GKFDLLSVSA TFLPPPPRTS LSPPVSNFFT VSLAGPQGQI IGGFVAGPLI SAGTVYVIAA
201: SFNNPSYHRL PAEEEQKHSA GTGEREGQSP PVSGGGEESG QMAGSGGESC GVSMYSCHMG GSDVIWAPTA RAPPPY
Arabidopsis Description
AHL17AT-hook motif nuclear-localized protein 17 [Source:UniProtKB/Swiss-Prot;Acc:Q9LTA2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.