Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY45266 | Canola | plastid | 69.09 | 92.68 |
| AT1G14490.2 | Thale cress | plastid | 54.18 | 66.22 |
| CDY21451 | Canola | cytosol | 58.18 | 65.31 |
| CDX83182 | Canola | cytosol | 58.18 | 65.31 |
| KRH62181 | Soybean | nucleus | 48.36 | 47.5 |
| KRH52892 | Soybean | nucleus | 48.36 | 46.83 |
| GSMUA_Achr7P19000_001 | Banana | cytosol, plasma membrane, plastid | 31.27 | 46.24 |
| KRH72453 | Soybean | nucleus | 44.36 | 45.02 |
| PGSC0003DMT400024250 | Potato | cytosol, plastid | 42.18 | 43.12 |
| KRH16838 | Soybean | nucleus | 38.91 | 41.8 |
| VIT_18s0001g07380.t01 | Wine grape | nucleus | 35.27 | 39.59 |
| GSMUA_Achr8P23410_001 | Banana | cytosol | 29.09 | 39.02 |
| Solyc12g087950.1.1 | Tomato | nucleus | 37.45 | 38.72 |
| PGSC0003DMT400005182 | Potato | nucleus | 37.45 | 38.43 |
| GSMUA_Achr10P... | Banana | nucleus | 38.18 | 37.63 |
| Solyc04g076220.2.1 | Tomato | nucleus | 43.27 | 35.42 |
| GSMUA_Achr3P06770_001 | Banana | cytosol | 29.09 | 35.24 |
| CDX90445 | Canola | plastid | 30.55 | 30.66 |
| CDY72485 | Canola | nucleus | 30.18 | 30.4 |
| CDX79599 | Canola | cytosol, peroxisome, plastid | 30.18 | 30.4 |
| CDY20404 | Canola | nucleus | 29.82 | 30.26 |
| GSMUA_AchrUn_... | Banana | nucleus | 36.73 | 30.15 |
| CDY59041 | Canola | cytosol, nucleus, peroxisome | 31.27 | 30.07 |
| CDY68242 | Canola | plastid | 32.0 | 29.63 |
| CDY45983 | Canola | nucleus | 30.91 | 29.51 |
| CDY41211 | Canola | plastid | 31.64 | 29.49 |
| CDY53687 | Canola | nucleus | 31.64 | 29.19 |
| CDY12779 | Canola | cytosol, nucleus, vacuole | 29.82 | 29.08 |
| CDY60321 | Canola | plastid | 31.27 | 29.05 |
| Os09t0464300-00 | Rice | nucleus | 35.27 | 29.04 |
| CDY23160 | Canola | cytosol, nucleus, vacuole | 29.45 | 29.03 |
| Zm00001d020768_P001 | Maize | cytosol | 34.55 | 28.53 |
| CDX78802 | Canola | cytosol | 30.18 | 28.52 |
| TraesCS5D01G252500.1 | Wheat | cytosol | 34.55 | 28.36 |
| CDY54780 | Canola | cytosol | 29.82 | 28.08 |
| CDX79838 | Canola | plastid | 26.55 | 28.08 |
| CDY53650 | Canola | plastid | 26.55 | 28.08 |
| CDX76085 | Canola | plastid | 31.27 | 28.01 |
| CDY02949 | Canola | plastid | 31.27 | 28.01 |
| Zm00001d005923_P001 | Maize | nucleus | 34.91 | 27.91 |
| CDX87591 | Canola | nucleus | 28.36 | 27.86 |
| TraesCS5B01G243200.1 | Wheat | cytosol, endoplasmic reticulum, nucleus | 33.82 | 27.68 |
| TraesCS5A01G245800.1 | Wheat | cytosol, endoplasmic reticulum, nucleus | 34.18 | 27.65 |
| CDY70947 | Canola | plastid | 25.82 | 27.2 |
| CDY21124 | Canola | cytosol, endoplasmic reticulum, peroxisome | 28.36 | 27.08 |
| Os08t0478466-01 | Rice | nucleus | 31.64 | 26.85 |
| CDY14862 | Canola | plastid | 25.45 | 26.82 |
| CDY30003 | Canola | cytosol, nucleus, peroxisome, plastid | 28.0 | 26.64 |
| OQU89633 | Sorghum | cytosol | 34.18 | 26.55 |
| Zm00001d031826_P001 | Maize | cytosol, endoplasmic reticulum, nucleus | 28.36 | 26.53 |
| CDX88286 | Canola | cytosol, endoplasmic reticulum, nucleus | 26.55 | 26.45 |
| CDY64701 | Canola | nucleus | 29.82 | 26.37 |
| CDY41289 | Canola | nucleus | 30.18 | 26.35 |
| CDX82978 | Canola | cytosol, nucleus, plastid | 30.18 | 26.35 |
| CDY37040 | Canola | nucleus | 29.45 | 26.3 |
| CDY18931 | Canola | nucleus | 29.45 | 26.21 |
| CDX74739 | Canola | nucleus | 29.45 | 26.13 |
| KXG25333 | Sorghum | cytosol | 31.64 | 26.13 |
| CDY27387 | Canola | nucleus | 29.45 | 25.96 |
| CDX98771 | Canola | nucleus | 29.82 | 25.87 |
| CDY49327 | Canola | cytosol, endoplasmic reticulum, nucleus | 29.45 | 25.8 |
| CDX68095 | Canola | cytosol | 25.09 | 25.56 |
| CDX84222 | Canola | cytosol | 17.82 | 25.52 |
| CDY04391 | Canola | nucleus | 30.18 | 25.38 |
| CDX85952 | Canola | cytosol | 25.09 | 25.37 |
| CDX69136 | Canola | cytosol, nucleus, peroxisome | 27.64 | 25.17 |
| CDX94128 | Canola | nucleus | 29.82 | 25.08 |
| CDX96613 | Canola | nucleus | 27.27 | 24.92 |
| CDY31677 | Canola | cytosol | 17.82 | 24.87 |
| CDX75499 | Canola | cytosol, nucleus, peroxisome | 27.27 | 24.83 |
| CDY33658 | Canola | nucleus | 26.18 | 24.66 |
| CDY31511 | Canola | nucleus | 22.91 | 23.42 |
| CDY01347 | Canola | nucleus | 22.91 | 23.16 |
| CDY31858 | Canola | nucleus | 22.91 | 23.08 |
| CDY29494 | Canola | nucleus | 22.91 | 22.99 |
Protein Annotations
| EnsemblPlants:CDY65376 | EnsemblPlantsGene:GSBRNA2T00045716001 | Gene3D:3.30.1330.80 | InterPro:IPR005175 | InterPro:PPC_dom | PANTHER:PTHR31100 |
| PANTHER:PTHR31100:SF1 | PFAM:PF03479 | PFscan:PS51742 | ProteinID:CDY65376 | ProteinID:CDY65376.1 | SEG:seg |
| SUPFAM:SSF117856 | UniParc:UPI0004EDB5D5 | UniProt:A0A078JI18 | MapMan:35.1 | : | : |
Description
BnaC05g49680DBnaC05g49680D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JI18]
Coordinates
chrLK034760:+:16331..18107
Molecular Weight (calculated)
29244.6 Da
IEP (calculated)
10.087
GRAVY (calculated)
-0.464
Length
275 amino acids
Sequence
(BLAST)
(BLAST)
001: MAQPQGHQGI QRRADKQQHR KKQMPGAECY KWHGLDIINN TTTSEKRRHW TSKFPQHQHA ISSSSFSTAA ASMEPVQRQR PRGRPQGSKN KPKPPVFLTL
101: EPPMSPYILQ VPSGNDVVAS INRFCRERSI GLCLLSGSGS VADVTLRQPS PAPPGSTITF HGKFDLLSVS AAFLPPPVSN SFAVSLAGPQ GQIIGGFVSG
201: PLISAGPVFV VAASLNNPSY HRLPAEVKQE NSSASAEAKE GKGQSPPVSG GGGESCHIEG SDVVWTPTAG APPEY
101: EPPMSPYILQ VPSGNDVVAS INRFCRERSI GLCLLSGSGS VADVTLRQPS PAPPGSTITF HGKFDLLSVS AAFLPPPVSN SFAVSLAGPQ GQIIGGFVSG
201: PLISAGPVFV VAASLNNPSY HRLPAEVKQE NSSASAEAKE GKGQSPPVSG GGGESCHIEG SDVVWTPTAG APPEY
001: MKGEYREQKS NEMFSKLPHH QQQQQQQQQQ HSLTSHFHLS STVTPTVDDS SIEVVRRPRG RPPGSKNKPK PPVFVTRDTD PPMSPYILEV PSGNDVVEAI
101: NRFCRRKSIG VCVLSGSGSV ANVTLRQPSP AALGSTITFH GKFDLLSVSA TFLPPPPRTS LSPPVSNFFT VSLAGPQGQI IGGFVAGPLI SAGTVYVIAA
201: SFNNPSYHRL PAEEEQKHSA GTGEREGQSP PVSGGGEESG QMAGSGGESC GVSMYSCHMG GSDVIWAPTA RAPPPY
101: NRFCRRKSIG VCVLSGSGSV ANVTLRQPSP AALGSTITFH GKFDLLSVSA TFLPPPPRTS LSPPVSNFFT VSLAGPQGQI IGGFVAGPLI SAGTVYVIAA
201: SFNNPSYHRL PAEEEQKHSA GTGEREGQSP PVSGGGEESG QMAGSGGESC GVSMYSCHMG GSDVIWAPTA RAPPPY
Arabidopsis Description
AHL17AT-hook motif nuclear-localized protein 17 [Source:UniProtKB/Swiss-Prot;Acc:Q9LTA2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.