Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, cytosol, peroxisome
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 1
- cytosol 1
- mitochondrion 1
- endoplasmic reticulum 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY30003 | Canola | cytosol, nucleus, peroxisome, plastid | 98.26 | 97.92 |
| Bra040135.1-P | Field mustard | cytosol, nucleus, peroxisome | 96.88 | 94.58 |
| AT3G04570.1 | Thale cress | cytosol, mitochondrion, peroxisome | 95.14 | 86.98 |
| CDY49327 | Canola | cytosol, endoplasmic reticulum, nucleus | 93.4 | 85.67 |
| CDY64701 | Canola | nucleus | 92.36 | 85.53 |
| Solyc11g006090.1.1 | Tomato | nucleus | 55.56 | 62.75 |
| PGSC0003DMT400073795 | Potato | nucleus | 61.81 | 59.93 |
| VIT_14s0081g00670.t01 | Wine grape | mitochondrion | 59.72 | 59.11 |
| KRG92616 | Soybean | nucleus | 55.21 | 57.4 |
| KRH34163 | Soybean | nucleus | 54.86 | 56.43 |
| CDY23160 | Canola | cytosol, nucleus, vacuole | 53.12 | 54.84 |
| CDY12779 | Canola | cytosol, nucleus, vacuole | 53.47 | 54.61 |
| CDX90445 | Canola | plastid | 43.06 | 45.26 |
| CDX79599 | Canola | cytosol, peroxisome, plastid | 42.71 | 45.05 |
| CDY72485 | Canola | nucleus | 42.71 | 45.05 |
| CDX84222 | Canola | cytosol | 29.51 | 44.27 |
| CDX78802 | Canola | cytosol | 44.44 | 43.99 |
| CDY54780 | Canola | cytosol | 44.44 | 43.84 |
| CDX79838 | Canola | plastid | 38.89 | 43.08 |
| CDY53650 | Canola | plastid | 38.89 | 43.08 |
| CDY70947 | Canola | plastid | 38.19 | 42.15 |
| CDY31677 | Canola | cytosol | 28.82 | 42.13 |
| CDY59041 | Canola | cytosol, nucleus, peroxisome | 41.67 | 41.96 |
| CDY14862 | Canola | plastid | 37.85 | 41.76 |
| CDY37040 | Canola | nucleus | 44.1 | 41.23 |
| CDY18931 | Canola | nucleus | 44.1 | 41.1 |
| CDX76085 | Canola | plastid | 43.75 | 41.04 |
| CDX74739 | Canola | nucleus | 44.1 | 40.97 |
| CDY27387 | Canola | nucleus | 44.1 | 40.71 |
| CDY68242 | Canola | plastid | 41.67 | 40.4 |
| CDY02949 | Canola | plastid | 43.06 | 40.39 |
| CDY41211 | Canola | plastid | 41.32 | 40.34 |
| CDY53687 | Canola | nucleus | 41.67 | 40.27 |
| CDX82978 | Canola | cytosol, nucleus, plastid | 43.75 | 40.0 |
| CDY41289 | Canola | nucleus | 43.75 | 40.0 |
| CDY60321 | Canola | plastid | 40.97 | 39.86 |
| CDY20404 | Canola | nucleus | 37.5 | 39.85 |
| CDX98771 | Canola | nucleus | 43.75 | 39.75 |
| CDY45983 | Canola | nucleus | 38.89 | 38.89 |
| CDX87591 | Canola | nucleus | 37.5 | 38.57 |
| CDX94128 | Canola | nucleus | 43.75 | 38.53 |
| CDY45266 | Canola | plastid | 26.04 | 36.59 |
| CDX88286 | Canola | cytosol, endoplasmic reticulum, nucleus | 34.72 | 36.23 |
| CDY04391 | Canola | nucleus | 40.97 | 36.09 |
| CDX96613 | Canola | nucleus | 37.5 | 35.88 |
| CDX75499 | Canola | cytosol, nucleus, peroxisome | 37.5 | 35.76 |
| CDX69136 | Canola | cytosol, nucleus, peroxisome | 37.15 | 35.43 |
| CDY33658 | Canola | nucleus | 35.76 | 35.27 |
| CDY21451 | Canola | cytosol | 29.86 | 35.1 |
| CDX68095 | Canola | cytosol | 32.64 | 34.81 |
| CDX83182 | Canola | cytosol | 29.51 | 34.69 |
| CDY31511 | Canola | nucleus | 31.6 | 33.83 |
| CDX85952 | Canola | cytosol | 31.6 | 33.46 |
| CDY01347 | Canola | nucleus | 31.25 | 33.09 |
| CDY31858 | Canola | nucleus | 30.9 | 32.6 |
| CDY29494 | Canola | nucleus | 30.9 | 32.48 |
| CDY65376 | Canola | nucleus | 27.08 | 28.36 |
Protein Annotations
| Gene3D:3.30.1330.80 | MapMan:35.1 | UniProt:A0A078G6U4 | InterPro:AT-hook_nuclear | EnsemblPlants:CDY21124 | ProteinID:CDY21124 |
| ProteinID:CDY21124.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003680 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| EnsemblPlantsGene:GSBRNA2T00015307001 | InterPro:IPR005175 | PFAM:PF03479 | PIRSF:PIRSF016021 | InterPro:PPC_dom | PFscan:PS51742 |
| PANTHER:PTHR31100 | PANTHER:PTHR31100:SF3 | SUPFAM:SSF117856 | UniParc:UPI0004EED3E9 | SEG:seg | : |
Description
BnaA01g33550DAT-hook motif nuclear-localized protein [Source:UniProtKB/TrEMBL;Acc:A0A078G6U4]
Coordinates
chrLK032116:-:124115..125059
Molecular Weight (calculated)
29602.6 Da
IEP (calculated)
6.512
GRAVY (calculated)
-0.402
Length
288 amino acids
Sequence
(BLAST)
(BLAST)
001: MANPWWTGQV NLSGLETTPP SSSQLKTPDL HISMNMAMDS GHNNHHHHQE VNTNNNNEDD RDNFSGDDHE PREGAVEAPT RRPRGRPAGS KNKPKPPIFI
101: ASGTDVIETL ATFARRRQRG ICILSGNGTV ANVTLRQPSV APVAAAPGGA AVLALQGRFE ILSLTGSFLP GPAPPGSTGL TIYLAGGQGQ VVGGSVVGPL
201: MAAGPVMLIA ATFSNATYER LPLDEEEAAE RGQLGGVGSP LSSGGGGGHG NQGLPAYNMP GNLASNGGGG GQMSGQEAYG WAQARSGF
101: ASGTDVIETL ATFARRRQRG ICILSGNGTV ANVTLRQPSV APVAAAPGGA AVLALQGRFE ILSLTGSFLP GPAPPGSTGL TIYLAGGQGQ VVGGSVVGPL
201: MAAGPVMLIA ATFSNATYER LPLDEEEAAE RGQLGGVGSP LSSGGGGGHG NQGLPAYNMP GNLASNGGGG GQMSGQEAYG WAQARSGF
001: MANPWWTGQV NLSGLETTPP GSSQLKKPDL HISMNMAMDS GHNNHHHHQE VDNNNNDDDR DNLSGDDHEP REGAVEAPTR RPRGRPAGSK NKPKPPIFVT
101: RDSPNALKSH VMEIASGTDV IETLATFARR RQRGICILSG NGTVANVTLR QPSTAAVAAA PGGAAVLALQ GRFEILSLTG SFLPGPAPPG STGLTIYLAG
201: GQGQVVGGSV VGPLMAAGPV MLIAATFSNA TYERLPLEEE EAAERGGGGG SGGVVPGQLG GGGSPLSSGA GGGDGNQGLP VYNMPGNLVS NGGSGGGGQM
301: SGQEAYGWAQ ARSGF
101: RDSPNALKSH VMEIASGTDV IETLATFARR RQRGICILSG NGTVANVTLR QPSTAAVAAA PGGAAVLALQ GRFEILSLTG SFLPGPAPPG STGLTIYLAG
201: GQGQVVGGSV VGPLMAAGPV MLIAATFSNA TYERLPLEEE EAAERGGGGG SGGVVPGQLG GGGSPLSSGA GGGDGNQGLP VYNMPGNLVS NGGSGGGGQM
301: SGQEAYGWAQ ARSGF
Arabidopsis Description
AHL19AT-hook motif nuclear-localized protein 19 [Source:UniProtKB/Swiss-Prot;Acc:Q9SR17]
SUBAcon: [mitochondrion,peroxisome,cytosol]
SUBAcon: [mitochondrion,peroxisome,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.