Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 1
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY49327 | Canola | cytosol, endoplasmic reticulum, nucleus | 97.75 | 96.82 |
| AT3G04570.1 | Thale cress | cytosol, mitochondrion, peroxisome | 93.57 | 92.38 |
| CDY21124 | Canola | cytosol, endoplasmic reticulum, peroxisome | 85.53 | 92.36 |
| CDY30003 | Canola | cytosol, nucleus, peroxisome, plastid | 84.57 | 91.0 |
| Solyc11g006090.1.1 | Tomato | nucleus | 56.91 | 69.41 |
| PGSC0003DMT400073795 | Potato | nucleus | 62.06 | 64.98 |
| VIT_14s0081g00670.t01 | Wine grape | mitochondrion | 60.13 | 64.26 |
| KRG92616 | Soybean | nucleus | 55.63 | 62.45 |
| KRH34163 | Soybean | nucleus | 55.95 | 62.14 |
| CDY12779 | Canola | cytosol, nucleus, vacuole | 54.34 | 59.93 |
| CDY23160 | Canola | cytosol, nucleus, vacuole | 53.7 | 59.86 |
| CDX79599 | Canola | cytosol, peroxisome, plastid | 42.12 | 47.99 |
| CDY72485 | Canola | nucleus | 42.12 | 47.99 |
| CDX90445 | Canola | plastid | 42.12 | 47.81 |
| CDX78802 | Canola | cytosol | 43.41 | 46.39 |
| CDY54780 | Canola | cytosol | 43.41 | 46.23 |
| CDY53650 | Canola | plastid | 38.26 | 45.77 |
| CDX79838 | Canola | plastid | 38.26 | 45.77 |
| CDY20404 | Canola | nucleus | 39.87 | 45.76 |
| CDY18931 | Canola | nucleus | 45.02 | 45.31 |
| CDX74739 | Canola | nucleus | 45.02 | 45.16 |
| CDY70947 | Canola | plastid | 37.62 | 44.83 |
| CDY45983 | Canola | nucleus | 41.48 | 44.79 |
| CDY59041 | Canola | cytosol, nucleus, peroxisome | 41.16 | 44.76 |
| CDY37040 | Canola | nucleus | 44.05 | 44.48 |
| CDY14862 | Canola | plastid | 37.3 | 44.44 |
| CDX87591 | Canola | nucleus | 39.87 | 44.29 |
| CDX84222 | Canola | cytosol | 27.33 | 44.27 |
| CDY27387 | Canola | nucleus | 44.05 | 43.91 |
| CDY68242 | Canola | plastid | 41.16 | 43.1 |
| CDY41211 | Canola | plastid | 40.84 | 43.05 |
| CDX82978 | Canola | cytosol, nucleus, plastid | 43.41 | 42.86 |
| CDY41289 | Canola | nucleus | 43.41 | 42.86 |
| CDY53687 | Canola | nucleus | 40.84 | 42.62 |
| CDX98771 | Canola | nucleus | 43.41 | 42.59 |
| CDX88286 | Canola | cytosol, endoplasmic reticulum, nucleus | 37.62 | 42.39 |
| CDY60321 | Canola | plastid | 40.19 | 42.23 |
| CDY31677 | Canola | cytosol | 26.69 | 42.13 |
| CDX76085 | Canola | plastid | 41.48 | 42.02 |
| CDY02949 | Canola | plastid | 40.84 | 41.37 |
| CDX94128 | Canola | nucleus | 43.41 | 41.28 |
| CDX96613 | Canola | nucleus | 39.55 | 40.86 |
| CDX68095 | Canola | cytosol | 35.37 | 40.74 |
| CDY33658 | Canola | nucleus | 37.94 | 40.41 |
| CDY01347 | Canola | nucleus | 34.73 | 39.71 |
| CDX85952 | Canola | cytosol | 34.73 | 39.71 |
| CDX75499 | Canola | cytosol, nucleus, peroxisome | 38.26 | 39.4 |
| CDX69136 | Canola | cytosol, nucleus, peroxisome | 37.94 | 39.07 |
| CDY31511 | Canola | nucleus | 33.76 | 39.03 |
| CDY45266 | Canola | plastid | 25.72 | 39.02 |
| CDY04391 | Canola | nucleus | 40.84 | 38.84 |
| CDY31858 | Canola | nucleus | 34.08 | 38.83 |
| CDY21451 | Canola | cytosol | 30.55 | 38.78 |
| CDX83182 | Canola | cytosol | 30.23 | 38.37 |
| CDY29494 | Canola | nucleus | 33.44 | 37.96 |
| CDY65376 | Canola | nucleus | 26.37 | 29.82 |
Protein Annotations
| Gene3D:3.30.1330.80 | MapMan:35.1 | UniProt:A0A078JGB7 | InterPro:AT-hook_nuclear | EnsemblPlants:CDY64701 | ProteinID:CDY64701 |
| ProteinID:CDY64701.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003680 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| EnsemblPlantsGene:GSBRNA2T00042572001 | InterPro:IPR005175 | PFAM:PF03479 | PIRSF:PIRSF016021 | InterPro:PPC_dom | PFscan:PS51742 |
| PANTHER:PTHR31100 | PANTHER:PTHR31100:SF3 | SUPFAM:SSF117856 | UniParc:UPI0004EF0D19 | SEG:seg | : |
Description
BnaCnng44570DAT-hook motif nuclear-localized protein [Source:UniProtKB/TrEMBL;Acc:A0A078JGB7]
Coordinates
chrLK034525:+:10979..11914
Molecular Weight (calculated)
31924.5 Da
IEP (calculated)
6.090
GRAVY (calculated)
-0.392
Length
311 amino acids
Sequence
(BLAST)
(BLAST)
001: MANPWWTGQV NLSGLETTPP SSSQLKKPDL HISMNMAMDS GHNNHHHHQE VDNSNEDDRD NLSGDEHEPR EGAVEAPTRR PRGRPAGSKN KPKPPIFVTR
101: DSPNALKSHV MEIASGTDVI ETLATFARRR QRGICILSGN GTVANVTLRQ PSAATVPGPP GGAAVLALQG RFEILSLTGS FLPGPAPPGS TGLTIYLAGG
201: QGQIVGGSVV GPLMAAGPVM LIAATFSNAT YERLPLDEEE VAEGGGGGVV PGQLGGVGSP LSSGGGRGDG NQGLPVYNMP ENLVSSGGGS GGGGQMSSQE
301: AYGWAQARSG F
101: DSPNALKSHV MEIASGTDVI ETLATFARRR QRGICILSGN GTVANVTLRQ PSAATVPGPP GGAAVLALQG RFEILSLTGS FLPGPAPPGS TGLTIYLAGG
201: QGQIVGGSVV GPLMAAGPVM LIAATFSNAT YERLPLDEEE VAEGGGGGVV PGQLGGVGSP LSSGGGRGDG NQGLPVYNMP ENLVSSGGGS GGGGQMSSQE
301: AYGWAQARSG F
001: MANPWWTGQV NLSGLETTPP GSSQLKKPDL HISMNMAMDS GHNNHHHHQE VDNNNNDDDR DNLSGDDHEP REGAVEAPTR RPRGRPAGSK NKPKPPIFVT
101: RDSPNALKSH VMEIASGTDV IETLATFARR RQRGICILSG NGTVANVTLR QPSTAAVAAA PGGAAVLALQ GRFEILSLTG SFLPGPAPPG STGLTIYLAG
201: GQGQVVGGSV VGPLMAAGPV MLIAATFSNA TYERLPLEEE EAAERGGGGG SGGVVPGQLG GGGSPLSSGA GGGDGNQGLP VYNMPGNLVS NGGSGGGGQM
301: SGQEAYGWAQ ARSGF
101: RDSPNALKSH VMEIASGTDV IETLATFARR RQRGICILSG NGTVANVTLR QPSTAAVAAA PGGAAVLALQ GRFEILSLTG SFLPGPAPPG STGLTIYLAG
201: GQGQVVGGSV VGPLMAAGPV MLIAATFSNA TYERLPLEEE EAAERGGGGG SGGVVPGQLG GGGSPLSSGA GGGDGNQGLP VYNMPGNLVS NGGSGGGGQM
301: SGQEAYGWAQ ARSGF
Arabidopsis Description
AHL19AT-hook motif nuclear-localized protein 19 [Source:UniProtKB/Swiss-Prot;Acc:Q9SR17]
SUBAcon: [mitochondrion,peroxisome,cytosol]
SUBAcon: [mitochondrion,peroxisome,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.