Factsheet for AT3G04570.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome, cytosol

Predictor Summary:

nucleus 1
cytosol 1
mitochondrion 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, peroxisome
Any Predictor:	cytosol, mitochondrion, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY21124	Canola	cytosol, endoplasmic reticulum, peroxisome	86.98	95.14
CDY30003	Canola	cytosol, nucleus, peroxisome, plastid	86.03	93.77
CDY64701	Canola	nucleus	92.38	93.57
Bra040135.1-P	Field mustard	cytosol, nucleus, peroxisome	87.62	93.56
CDY49327	Canola	cytosol, endoplasmic reticulum, nucleus	93.02	93.31
Bra040184.1-P	Field mustard	cytosol, nucleus, peroxisome	92.7	92.99
Solyc11g006090.1.1	Tomato	nucleus	56.83	70.2
PGSC0003DMT400073795	Potato	nucleus	62.86	66.67
VIT_14s0081g00670.t01	Wine grape	mitochondrion	60.63	65.64
KRG92616	Soybean	nucleus	55.87	63.54
AT4G14465.1	Thale cress	cytosol, nucleus, plastid	55.87	62.63
KRH34163	Soybean	nucleus	55.56	62.5
AT3G60870.1	Thale cress	nucleus	40.0	47.55
AT4G17800.1	Thale cress	cytosol	42.86	46.23
AT2G42940.1	Thale cress	plastid	37.46	45.91
AT2G45430.1	Thale cress	nucleus	45.71	45.43
AT2G35270.1	Thale cress	nucleus	40.95	45.26
AT3G55560.1	Thale cress	plastid	43.81	44.52
AT1G76500.1	Thale cress	nucleus	41.9	43.71
AT1G20900.1	Thale cress	nucleus	42.22	42.77
AT4G22810.1	Thale cress	nucleus	43.49	42.28
AT4G35390.1	Thale cress	cytosol	38.41	40.47
AT1G14490.2	Thale cress	plastid	28.89	40.44
AT4G12050.1	Thale cress	cytosol, nucleus, plastid	42.22	39.23
AT5G49700.1	Thale cress	nucleus	32.7	37.32

Protein Annotations

Gene3D:3.30.1330.80	MapMan:35.1	EntrezGene:819613	UniProt:A0A178VG97	ProteinID:AAF04888.1	ProteinID:AEE74098.1
Symbol:AHL19	EMBL:AK228206	InterPro:AT-hook_nuclear	ArrayExpress:AT3G04570	EnsemblPlantsGene:AT3G04570	RefSeq:AT3G04570
TAIR:AT3G04570	RefSeq:AT3G04570-TAIR-G	EnsemblPlants:AT3G04570.1	TAIR:AT3G04570.1	EMBL:AY085572	EMBL:BR000355
EMBL:BT005882	GO:GO:0002376	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003680
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0006950	GO:GO:0006952	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009605	GO:GO:0009607	GO:GO:0009987	GO:GO:0045087
GO:GO:0045824	GO:GO:0050832	InterPro:IPR005175	RefSeq:NP_566232.1	ProteinID:OAP04764.1	PFAM:PF03479
PIRSF:PIRSF016021	PO:PO:0009005	PO:PO:0020100	InterPro:PPC_dom	PFscan:PS51742	PANTHER:PTHR31100
PANTHER:PTHR31100:SF3	UniProt:Q9SR17	SUPFAM:SSF117856	UniParc:UPI0000060D8A	SEG:seg	:

Description

AHL19AT-hook motif nuclear-localized protein 19 [Source:UniProtKB/Swiss-Prot;Acc:Q9SR17]

Coordinates

chr3:+:1230746..1232451

Molecular Weight (calculated)

32039.5 Da

IEP (calculated)

6.308

GRAVY (calculated)

-0.395

Length

315 amino acids

Sequence
(BLAST)

001: MANPWWTGQV NLSGLETTPP GSSQLKKPDL HISMNMAMDS GHNNHHHHQE VDNNNNDDDR DNLSGDDHEP REGAVEAPTR RPRGRPAGSK NKPKPPIFVT
101: RDSPNALKSH VMEIASGTDV IETLATFARR RQRGICILSG NGTVANVTLR QPSTAAVAAA PGGAAVLALQ GRFEILSLTG SFLPGPAPPG STGLTIYLAG
201: GQGQVVGGSV VGPLMAAGPV MLIAATFSNA TYERLPLEEE EAAERGGGGG SGGVVPGQLG GGGSPLSSGA GGGDGNQGLP VYNMPGNLVS NGGSGGGGQM
301: SGQEAYGWAQ ARSGF

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.