Factsheet for AT2G45430.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra039338.1-P	Field mustard	nucleus	94.01	96.75
CDY37040	Canola	nucleus	93.69	96.43
CDY27387	Canola	nucleus	93.38	94.87
CDY18931	Canola	nucleus	90.22	92.56
CDX74739	Canola	nucleus	90.22	92.26
Bra004911.1-P	Field mustard	nucleus	88.64	91.23
VIT_15s0048g00780.t01	Wine grape	nucleus	63.72	67.33
KRH76289	Soybean	nucleus	60.25	66.32
KRH65251	Soybean	nucleus	64.67	66.13
AT3G60870.1	Thale cress	nucleus	54.26	64.91
PGSC0003DMT400033248	Potato	nucleus	61.51	63.31
Solyc01g091470.2.1	Tomato	nucleus	60.25	63.24
AT4G22810.1	Thale cress	nucleus	59.31	58.02
GSMUA_Achr1P19850_001	Banana	nucleus	54.26	56.03
AT4G12050.1	Thale cress	cytosol, nucleus, plastid	58.99	55.16
AT4G17800.1	Thale cress	cytosol	47.63	51.71
AT2G35270.1	Thale cress	nucleus	42.27	47.02
AT2G42940.1	Thale cress	plastid	37.54	46.3
AT4G14465.1	Thale cress	cytosol, nucleus, plastid	40.69	45.91
AT3G04570.1	Thale cress	cytosol, mitochondrion, peroxisome	45.43	45.71
AT4G35390.1	Thale cress	cytosol	40.38	42.81
GSMUA_Achr3P11300_001	Banana	nucleus	30.91	42.79
AT3G55560.1	Thale cress	plastid	41.64	42.58
AT1G20900.1	Thale cress	nucleus	40.38	41.16
AT1G76500.1	Thale cress	nucleus	38.8	40.73
AT1G14490.2	Thale cress	plastid	25.87	36.44
AT5G49700.1	Thale cress	nucleus	28.71	32.97

Protein Annotations

Gene3D:3.30.1330.80	MapMan:35.1	EntrezGene:819151	UniProt:A0A178VXD2	ProteinID:AAB82621.1	EMBL:AB493592
ProteinID:AEC10552.1	Symbol:AHL22	InterPro:AT-hook_nuclear	ArrayExpress:AT2G45430	EnsemblPlantsGene:AT2G45430	RefSeq:AT2G45430
TAIR:AT2G45430	RefSeq:AT2G45430-TAIR-G	EnsemblPlants:AT2G45430.1	TAIR:AT2G45430.1	EMBL:BR000358	EMBL:BT014980
EMBL:BT020250	GO:GO:0000003	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003680
GO:GO:0003700	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007275	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009628	GO:GO:0009640	GO:GO:0009647	GO:GO:0009791
GO:GO:0009908	GO:GO:0009987	GO:GO:0010228	GO:GO:0042826	GO:GO:0043621	InterPro:IPR005175
RefSeq:NP_182067.1	UniProt:O22130	ProteinID:OAP09492.1	PFAM:PF03479	PIRSF:PIRSF016021	PO:PO:0004724
PO:PO:0007611	PO:PO:0009005	PO:PO:0009046	PO:PO:0020100	InterPro:PPC_dom	PFscan:PS51742
PANTHER:PTHR31100	PANTHER:PTHR31100:SF2	SUPFAM:SSF117856	UniParc:UPI000009FD75	SEG:seg	:

Description

AHL22AT-hook motif nuclear-localized protein [Source:UniProtKB/TrEMBL;Acc:A0A178VXD2]

Coordinates

chr2:+:18727504..18729272

Molecular Weight (calculated)

33521.3 Da

IEP (calculated)

6.967

GRAVY (calculated)

-0.583

Length

317 amino acids

Sequence
(BLAST)

001: MDQVSRSLPP PFLSRDLHLH PHHQFQHQQQ QQQQNHGHDI DQHRIGGLKR DRDADIDPNE HSSAGKDQST PGSGGESGGG GGGDNHITRR PRGRPAGSKN
101: KPKPPIIITR DSANALKSHV MEVANGCDVM ESVTVFARRR QRGICVLSGN GAVTNVTIRQ PASVPGGGSS VVNLHGRFEI LSLSGSFLPP PAPPAASGLT
201: IYLAGGQGQV VGGSVVGPLM ASGPVVIMAA SFGNAAYERL PLEEDDQEEQ TAGAVANNID GNATMGGGTQ TQTQTQQQQQ QQLMQDPTSF IQGLPPNLMN
301: SVQLPAEAYW GTPRPSF

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.