Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 6
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY53687 | Canola | nucleus | 87.74 | 91.28 |
| Bra003217.1-P | Field mustard | nucleus | 87.42 | 90.94 |
| CDY60321 | Canola | plastid | 86.45 | 90.54 |
| CDY68242 | Canola | plastid | 85.16 | 88.89 |
| Bra007176.1-P | Field mustard | plastid | 84.84 | 88.55 |
| CDY02949 | Canola | plastid | 86.45 | 87.3 |
| Bra014735.1-P | Field mustard | plastid | 86.45 | 87.3 |
| CDX76085 | Canola | plastid | 86.45 | 87.3 |
| CDY41211 | Canola | plastid | 82.9 | 87.12 |
| KRH73062 | Soybean | cytosol | 41.94 | 56.77 |
| KRH15076 | Soybean | nucleus | 31.29 | 55.75 |
| KRH31005 | Soybean | nucleus | 51.29 | 55.02 |
| GSMUA_Achr5P28720_001 | Banana | mitochondrion, peroxisome, plastid | 45.81 | 54.2 |
| TraesCS4A01G094700.1 | Wheat | cytosol, nucleus, plastid | 44.19 | 53.52 |
| TraesCS4B01G209800.1 | Wheat | cytosol, nucleus, plastid | 43.87 | 53.12 |
| TraesCS4D01G210500.1 | Wheat | cytosol, nucleus, plastid | 43.87 | 53.12 |
| Os03t0270000-01 | Rice | nucleus | 44.19 | 53.1 |
| HORVU4Hr1G060280.1 | Barley | cytosol, nucleus, plastid | 43.55 | 52.73 |
| KRG97871 | Soybean | nucleus | 51.29 | 52.65 |
| AT4G14465.1 | Thale cress | cytosol, nucleus, plastid | 46.45 | 51.25 |
| VIT_13s0019g02080.t01 | Wine grape | nucleus | 53.55 | 50.76 |
| EER95114 | Sorghum | nucleus | 43.87 | 50.0 |
| Zm00001d028577_P001 | Maize | nucleus | 43.55 | 49.45 |
| GSMUA_Achr11P... | Banana | nucleus | 46.77 | 49.32 |
| GSMUA_Achr7P10630_001 | Banana | plastid | 44.84 | 47.77 |
| PGSC0003DMT400069792 | Potato | cytosol, nucleus, plastid | 47.42 | 46.82 |
| Solyc05g053000.1.1 | Tomato | nucleus | 46.13 | 45.69 |
| AT3G60870.1 | Thale cress | nucleus | 38.39 | 44.91 |
| GSMUA_Achr6P01060_001 | Banana | nucleus | 39.68 | 43.93 |
| AT3G04570.1 | Thale cress | cytosol, mitochondrion, peroxisome | 44.52 | 43.81 |
| GSMUA_Achr6P04980_001 | Banana | cytosol, nucleus, plastid | 40.0 | 43.21 |
| AT2G42940.1 | Thale cress | plastid | 35.81 | 43.19 |
| GSMUA_Achr7P15000_001 | Banana | nucleus | 38.71 | 43.01 |
| GSMUA_Achr9P28280_001 | Banana | plastid | 40.97 | 42.33 |
| AT2G45430.1 | Thale cress | nucleus | 42.58 | 41.64 |
| AT4G17800.1 | Thale cress | cytosol | 39.03 | 41.44 |
| AT1G14490.2 | Thale cress | plastid | 29.35 | 40.44 |
| AT2G35270.1 | Thale cress | nucleus | 37.1 | 40.35 |
| AT1G20900.1 | Thale cress | nucleus | 39.35 | 39.23 |
| AT1G76500.1 | Thale cress | nucleus | 37.74 | 38.74 |
| AT4G35390.1 | Thale cress | cytosol | 37.1 | 38.46 |
| AT5G49700.1 | Thale cress | nucleus | 34.19 | 38.41 |
| AT4G22810.1 | Thale cress | nucleus | 39.35 | 37.65 |
| AT4G12050.1 | Thale cress | cytosol, nucleus, plastid | 40.97 | 37.46 |
Protein Annotations
| Gene3D:3.30.1330.80 | MapMan:35.1 | EntrezGene:824721 | UniProt:A0A178VH84 | ProteinID:AEE79400.1 | Symbol:AGF2 |
| InterPro:AT-hook_nuclear | ArrayExpress:AT3G55560 | EnsemblPlantsGene:AT3G55560 | RefSeq:AT3G55560 | TAIR:AT3G55560 | RefSeq:AT3G55560-TAIR-G |
| EnsemblPlants:AT3G55560.1 | TAIR:AT3G55560.1 | EMBL:AY086028 | EMBL:BR000351 | EMBL:BT024777 | ProteinID:CAB75914.1 |
| GO:GO:0002376 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003680 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0006950 | GO:GO:0006952 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0045087 | GO:GO:0045824 | InterPro:IPR005175 | RefSeq:NP_191115.1 |
| ProteinID:OAP04383.1 | PFAM:PF03479 | PIRSF:PIRSF016021 | PO:PO:0000018 | PO:PO:0000037 | PO:PO:0000229 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0004507 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0009005 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0020001 |
| PO:PO:0020003 | PO:PO:0020006 | PO:PO:0020023 | PO:PO:0020030 | PO:PO:0020100 | InterPro:PPC_dom |
| PFscan:PS51742 | PANTHER:PTHR31100 | PANTHER:PTHR31100:SF13 | UniProt:Q9M2S3 | SUPFAM:SSF117856 | UniParc:UPI000004B2DF |
| SEG:seg | : | : | : | : | : |
Description
AHL15AT-hook motif nuclear-localized protein [Source:UniProtKB/TrEMBL;Acc:A0A178VH84]
Coordinates
chr3:-:20604616..20606650
Molecular Weight (calculated)
32604.8 Da
IEP (calculated)
5.957
GRAVY (calculated)
-0.645
Length
310 amino acids
Sequence
(BLAST)
(BLAST)
001: MANPWWVGNV AIGGVESPVT SSAPSLHHRN SNNNNPPTMT RSDPRLDHDF TTNNSGSPNT QTQSQEEQNS RDEQPAVEPG SGSGSTGRRP RGRPPGSKNK
101: PKSPVVVTKE SPNSLQSHVL EIATGADVAE SLNAFARRRG RGVSVLSGSG LVTNVTLRQP AASGGVVSLR GQFEILSMCG AFLPTSGSPA AAAGLTIYLA
201: GAQGQVVGGG VAGPLIASGP VIVIAATFCN ATYERLPIEE EQQQEQPLQL EDGKKQKEEN DDNESGNNGN EGSMQPPMYN MPPNFIPNGH QMAQHDVYWG
301: GPPPRAPPSY
101: PKSPVVVTKE SPNSLQSHVL EIATGADVAE SLNAFARRRG RGVSVLSGSG LVTNVTLRQP AASGGVVSLR GQFEILSMCG AFLPTSGSPA AAAGLTIYLA
201: GAQGQVVGGG VAGPLIASGP VIVIAATFCN ATYERLPIEE EQQQEQPLQL EDGKKQKEEN DDNESGNNGN EGSMQPPMYN MPPNFIPNGH QMAQHDVYWG
301: GPPPRAPPSY
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.