Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc05g053000.1.1 | Tomato | nucleus | 88.22 | 88.5 |
| KRH15076 | Soybean | nucleus | 32.48 | 58.62 |
| KRH73062 | Soybean | cytosol | 42.68 | 58.52 |
| KRH31005 | Soybean | nucleus | 51.59 | 56.06 |
| GSMUA_Achr5P28720_001 | Banana | mitochondrion, peroxisome, plastid | 46.5 | 55.73 |
| KRG97871 | Soybean | nucleus | 52.87 | 54.97 |
| GSMUA_Achr6P01060_001 | Banana | nucleus | 47.77 | 53.57 |
| Os03t0270000-01 | Rice | nucleus | 43.95 | 53.49 |
| TraesCS4A01G094700.1 | Wheat | cytosol, nucleus, plastid | 43.31 | 53.12 |
| TraesCS4D01G210500.1 | Wheat | cytosol, nucleus, plastid | 42.99 | 52.73 |
| TraesCS4B01G209800.1 | Wheat | cytosol, nucleus, plastid | 42.99 | 52.73 |
| HORVU4Hr1G060280.1 | Barley | cytosol, nucleus, plastid | 42.68 | 52.34 |
| PGSC0003DMT400045315 | Potato | nucleus | 35.67 | 50.68 |
| GSMUA_Achr11P... | Banana | nucleus | 47.13 | 50.34 |
| EER95114 | Sorghum | nucleus | 43.31 | 50.0 |
| GSMUA_Achr6P04980_001 | Banana | cytosol, nucleus, plastid | 45.54 | 49.83 |
| GSMUA_Achr9P28280_001 | Banana | plastid | 47.45 | 49.67 |
| VIT_13s0019g02080.t01 | Wine grape | nucleus | 50.96 | 48.93 |
| CDY41211 | Canola | plastid | 45.86 | 48.81 |
| Zm00001d028577_P001 | Maize | nucleus | 42.36 | 48.72 |
| PGSC0003DMT400004515 | Potato | nucleus | 34.71 | 48.66 |
| Bra003217.1-P | Field mustard | nucleus | 46.18 | 48.66 |
| CDY53687 | Canola | nucleus | 46.18 | 48.66 |
| CDY60321 | Canola | plastid | 45.86 | 48.65 |
| CDY68242 | Canola | plastid | 45.86 | 48.48 |
| Bra007176.1-P | Field mustard | plastid | 45.54 | 48.15 |
| GSMUA_Achr7P10630_001 | Banana | plastid | 44.59 | 48.11 |
| AT3G55560.1 | Thale cress | plastid | 46.82 | 47.42 |
| PGSC0003DMT400002959 | Potato | nucleus | 39.81 | 47.17 |
| PGSC0003DMT400073795 | Potato | nucleus | 44.59 | 47.14 |
| PGSC0003DMT400044451 | Potato | nucleus | 42.68 | 47.02 |
| CDX76085 | Canola | plastid | 45.86 | 46.91 |
| Bra014735.1-P | Field mustard | plastid | 45.86 | 46.91 |
| CDY02949 | Canola | plastid | 45.54 | 46.58 |
| PGSC0003DMT400044573 | Potato | cytosol | 35.99 | 45.02 |
| PGSC0003DMT400025705 | Potato | plastid | 36.62 | 44.23 |
| PGSC0003DMT400045203 | Potato | nucleus | 39.81 | 43.1 |
| PGSC0003DMT400010004 | Potato | nucleus | 39.49 | 42.32 |
| PGSC0003DMT400033248 | Potato | nucleus | 41.4 | 42.21 |
| GSMUA_Achr7P15000_001 | Banana | nucleus | 36.62 | 41.22 |
| PGSC0003DMT400032509 | Potato | nucleus | 38.53 | 38.91 |
| PGSC0003DMT400024250 | Potato | cytosol, plastid | 30.57 | 35.69 |
| PGSC0003DMT400005182 | Potato | nucleus | 27.71 | 32.46 |
Protein Annotations
| EntrezGene:102597116 | Gene3D:3.30.1330.80 | MapMan:35.1 | InterPro:AT-hook_nuclear | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003680 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR005175 | UniProt:M1CL63 | PFAM:PF03479 |
| EnsemblPlantsGene:PGSC0003DMG400027139 | PGSC:PGSC0003DMG400027139 | EnsemblPlants:PGSC0003DMT400069792 | PIRSF:PIRSF016021 | InterPro:PPC_dom | PFscan:PS51742 |
| PANTHER:PTHR31100 | PANTHER:PTHR31100:SF13 | SUPFAM:SSF117856 | UniParc:UPI0002967B8E | RefSeq:XP_006355697.1 | SEG:seg |
Description
ESC [Source:PGSC_GENE;Acc:PGSC0003DMG400027139]
Coordinates
chr5:+:48282440..48283640
Molecular Weight (calculated)
33495.3 Da
IEP (calculated)
4.898
GRAVY (calculated)
-0.445
Length
314 amino acids
Sequence
(BLAST)
(BLAST)
001: MANRWWDGNT AMNPMVSSSN NPEEEEKSNK LRPGKEQEFM NTITTTTNSS ENPNEMSQEG EENIQSPEGL FSSGPSSSMR RAGRRPRGRP MGSKNKPKPP
101: IVVTKDAPNS LKSHVLEIKS GSDIIESIAA FANRRSCGVS VLSGSGIVTN VTLRQPAAVT VAGGVITLHG RFEILSLSGA FLPAPNSPVG ATGLTVYLAG
201: SQGQVVGGNV VGELIASGPV IVIAASFTNA TFERLPIVEN DEEEEENNVN EGMQMQLPTA SGVGNVNSDN LQVDHPSPST SMPMYNLATN VLPNDQMHHE
301: VFWTPPPSRP TPYS
101: IVVTKDAPNS LKSHVLEIKS GSDIIESIAA FANRRSCGVS VLSGSGIVTN VTLRQPAAVT VAGGVITLHG RFEILSLSGA FLPAPNSPVG ATGLTVYLAG
201: SQGQVVGGNV VGELIASGPV IVIAASFTNA TFERLPIVEN DEEEEENNVN EGMQMQLPTA SGVGNVNSDN LQVDHPSPST SMPMYNLATN VLPNDQMHHE
301: VFWTPPPSRP TPYS
001: MANPWWVGNV AIGGVESPVT SSAPSLHHRN SNNNNPPTMT RSDPRLDHDF TTNNSGSPNT QTQSQEEQNS RDEQPAVEPG SGSGSTGRRP RGRPPGSKNK
101: PKSPVVVTKE SPNSLQSHVL EIATGADVAE SLNAFARRRG RGVSVLSGSG LVTNVTLRQP AASGGVVSLR GQFEILSMCG AFLPTSGSPA AAAGLTIYLA
201: GAQGQVVGGG VAGPLIASGP VIVIAATFCN ATYERLPIEE EQQQEQPLQL EDGKKQKEEN DDNESGNNGN EGSMQPPMYN MPPNFIPNGH QMAQHDVYWG
301: GPPPRAPPSY
101: PKSPVVVTKE SPNSLQSHVL EIATGADVAE SLNAFARRRG RGVSVLSGSG LVTNVTLRQP AASGGVVSLR GQFEILSMCG AFLPTSGSPA AAAGLTIYLA
201: GAQGQVVGGG VAGPLIASGP VIVIAATFCN ATYERLPIEE EQQQEQPLQL EDGKKQKEEN DDNESGNNGN EGSMQPPMYN MPPNFIPNGH QMAQHDVYWG
301: GPPPRAPPSY
Arabidopsis Description
AHL15AT-hook motif nuclear-localized protein [Source:UniProtKB/TrEMBL;Acc:A0A178VH84]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.