CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 6
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra003217.1-P	Field mustard	nucleus	97.97	97.32
CDY53687	Canola	nucleus	97.97	97.32
CDY68242	Canola	plastid	88.85	88.55
CDY41211	Canola	plastid	86.82	87.12
AT3G55560.1	Thale cress	plastid	90.54	86.45
CDY02949	Canola	plastid	88.18	85.02
CDX76085	Canola	plastid	87.5	84.36
KRH15076	Soybean	nucleus	32.77	55.75
KRH73062	Soybean	cytosol	42.91	55.46
KRH31005	Soybean	nucleus	52.03	53.29
GSMUA_Achr5P28720_001	Banana	mitochondrion, peroxisome, plastid	45.95	51.91
KRG97871	Soybean	nucleus	52.36	51.32
TraesCS4A01G094700.1	Wheat	cytosol, nucleus, plastid	44.26	51.17
TraesCS4B01G209800.1	Wheat	cytosol, nucleus, plastid	43.92	50.78
TraesCS4D01G210500.1	Wheat	cytosol, nucleus, plastid	43.92	50.78
Os03t0270000-01	Rice	nucleus	44.26	50.78
HORVU4Hr1G060280.1	Barley	cytosol, nucleus, plastid	43.58	50.39
VIT_13s0019g02080.t01	Wine grape	nucleus	54.39	49.24
CDY23160	Canola	cytosol, nucleus, vacuole	46.28	49.1
CDY12779	Canola	cytosol, nucleus, vacuole	45.95	48.23
EER95114	Sorghum	nucleus	43.58	47.43
GSMUA_Achr11P...	Banana	nucleus	46.62	46.94
Zm00001d028577_P001	Maize	nucleus	43.24	46.89
GSMUA_Achr7P10630_001	Banana	plastid	45.27	46.05
PGSC0003DMT400069792	Potato	cytosol, nucleus, plastid	48.65	45.86
Solyc05g053000.1.1	Tomato	nucleus	46.96	44.41
CDX87591	Canola	nucleus	40.88	43.21
CDY70947	Canola	plastid	37.5	42.53
GSMUA_Achr6P04980_001	Banana	cytosol, nucleus, plastid	41.22	42.51
CDX90445	Canola	plastid	39.19	42.34
CDY14862	Canola	plastid	37.16	42.15
GSMUA_Achr6P01060_001	Banana	nucleus	39.86	42.14
CDX79838	Canola	plastid	36.82	41.92
CDY53650	Canola	plastid	36.82	41.92
CDY20404	Canola	nucleus	38.18	41.7
GSMUA_Achr7P15000_001	Banana	nucleus	39.19	41.58
GSMUA_Achr9P28280_001	Banana	plastid	41.55	41.0
CDY45266	Canola	plastid	28.38	40.98
CDY21124	Canola	cytosol, endoplasmic reticulum, peroxisome	39.86	40.97
CDY18931	Canola	nucleus	42.57	40.78
CDX74739	Canola	nucleus	42.57	40.65
CDY45983	Canola	nucleus	39.53	40.62
CDY30003	Canola	cytosol, nucleus, peroxisome, plastid	39.53	40.48
CDY37040	Canola	nucleus	41.89	40.26
CDX88286	Canola	cytosol, endoplasmic reticulum, nucleus	37.5	40.22
CDX78802	Canola	cytosol	39.53	40.21
CDY64701	Canola	nucleus	42.23	40.19
CDY21451	Canola	cytosol	33.11	40.0
CDY49327	Canola	cytosol, endoplasmic reticulum, nucleus	42.23	39.81
CDX68095	Canola	cytosol	36.15	39.63
CDX83182	Canola	cytosol	32.77	39.59
CDY27387	Canola	nucleus	41.55	39.42
CDY54780	Canola	cytosol	38.85	39.38
CDX79599	Canola	cytosol, peroxisome, plastid	36.15	39.19
CDX96613	Canola	nucleus	39.53	38.87
CDY72485	Canola	nucleus	35.47	38.46
CDY59041	Canola	cytosol, nucleus, peroxisome	36.49	37.76
CDX85952	Canola	cytosol	34.46	37.5
CDY33658	Canola	nucleus	36.82	37.33
CDY31511	Canola	nucleus	33.45	36.8
CDX75499	Canola	cytosol, nucleus, peroxisome	36.82	36.09
CDY01347	Canola	nucleus	33.11	36.03
CDX69136	Canola	cytosol, nucleus, peroxisome	36.49	35.76
CDY41289	Canola	nucleus	37.84	35.56
CDX82978	Canola	cytosol, nucleus, plastid	37.84	35.56
CDY31858	Canola	nucleus	32.77	35.53
CDY29494	Canola	nucleus	32.77	35.4
CDX98771	Canola	nucleus	37.16	34.7
CDX84222	Canola	cytosol	22.3	34.38
CDY04391	Canola	nucleus	37.5	33.95
CDX94128	Canola	nucleus	37.16	33.64
CDY31677	Canola	cytosol	22.3	33.5
CDY65376	Canola	nucleus	29.05	31.27

Protein Annotations

Gene3D:3.30.1330.80	MapMan:35.1	UniProt:A0A078J8X1	InterPro:AT-hook_nuclear	EnsemblPlants:CDY60321	ProteinID:CDY60321
ProteinID:CDY60321.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003680	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
EnsemblPlantsGene:GSBRNA2T00028492001	InterPro:IPR005175	PFAM:PF03479	PIRSF:PIRSF016021	InterPro:PPC_dom	PFscan:PS51742
PANTHER:PTHR31100	PANTHER:PTHR31100:SF13	SUPFAM:SSF117856	UniParc:UPI0004EE1F54	SEG:seg	:

Description

BnaCnng36000DAT-hook motif nuclear-localized protein [Source:UniProtKB/TrEMBL;Acc:A0A078J8X1]

Coordinates

chrLK033869:-:6339..7937

Molecular Weight (calculated)

31131.2 Da

IEP (calculated)

6.307

GRAVY (calculated)

-0.510

Length

296 amino acids

Sequence
(BLAST)

001: MANPWWVGNV AIGVESPVTS SAPSLHHRSS NNPNMTRSDP RLDHDFTNNS GSPNTHTQNS QEEQDELPAV EHGSGSGSTG RRPRGRPPGS KNKPKNPVVV
101: TKESPNSLQS HVLEIATGAD VAESLNAFAR RRGRGVSVLS GSGLVTNVTL RQPAASGVVS LRGQFEILSM CGAFLPTSGS PAAAAGLTIY LAGAQGQVLG
201: GGVAGPLIAS GPVIVIAATF CNASFERLPF EDEQQQPQVE EAKEKENDDN KSGNDGTEGS MQPMYNMTPN VMPNGHQIAQ HDVFWGAPPP RVPPSY

Best Arabidopsis Sequence Match ( AT3G55560.1 )
(BLAST)

001: MANPWWVGNV AIGGVESPVT SSAPSLHHRN SNNNNPPTMT RSDPRLDHDF TTNNSGSPNT QTQSQEEQNS RDEQPAVEPG SGSGSTGRRP RGRPPGSKNK
101: PKSPVVVTKE SPNSLQSHVL EIATGADVAE SLNAFARRRG RGVSVLSGSG LVTNVTLRQP AASGGVVSLR GQFEILSMCG AFLPTSGSPA AAAGLTIYLA
201: GAQGQVVGGG VAGPLIASGP VIVIAATFCN ATYERLPIEE EQQQEQPLQL EDGKKQKEEN DDNESGNNGN EGSMQPPMYN MPPNFIPNGH QMAQHDVYWG
301: GPPPRAPPSY

Arabidopsis Description

AHL15AT-hook motif nuclear-localized protein [Source:UniProtKB/TrEMBL;Acc:A0A178VH84]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.