Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY31511 | Canola | nucleus | 84.59 | 91.82 |
| CDX96613 | Canola | nucleus | 94.18 | 91.36 |
| CDY29494 | Canola | nucleus | 84.59 | 90.15 |
| CDY01347 | Canola | nucleus | 83.56 | 89.71 |
| CDY31858 | Canola | nucleus | 83.22 | 89.01 |
| AT1G20900.1 | Thale cress | nucleus | 92.47 | 86.82 |
| CDX87591 | Canola | nucleus | 68.84 | 71.79 |
| CDX88286 | Canola | cytosol, endoplasmic reticulum, nucleus | 67.12 | 71.01 |
| CDY20404 | Canola | nucleus | 65.41 | 70.48 |
| CDY45983 | Canola | nucleus | 67.47 | 68.4 |
| CDX68095 | Canola | cytosol | 61.99 | 67.04 |
| CDX85952 | Canola | cytosol | 60.96 | 65.44 |
| Solyc04g082810.2.1 | Tomato | cytosol, nucleus, peroxisome | 48.29 | 57.55 |
| KRH51551 | Soybean | plastid | 39.38 | 56.37 |
| PGSC0003DMT400025705 | Potato | plastid | 49.32 | 55.38 |
| GSMUA_Achr9P12320_001 | Banana | plastid | 45.55 | 47.33 |
| Zm00001d051620_P001 | Maize | plastid | 50.68 | 46.69 |
| TraesCS6A01G277700.1 | Wheat | plastid | 51.71 | 46.18 |
| EES05630 | Sorghum | cytosol, mitochondrion, nucleus, plastid | 51.71 | 46.04 |
| Zm00001d017825_P001 | Maize | plastid | 51.03 | 45.99 |
| HORVU6Hr1G070090.1 | Barley | plastid | 51.71 | 45.62 |
| TraesCS6B01G306100.1 | Wheat | plastid | 51.37 | 45.59 |
| TraesCS6D01G258400.1 | Wheat | plastid | 51.37 | 45.59 |
| Os02t0713700-01 | Rice | cytosol, mitochondrion, nucleus, plastid | 51.71 | 44.94 |
| Zm00001d045928_P001 | Maize | nucleus | 45.89 | 43.79 |
| CDX69136 | Canola | cytosol, nucleus, peroxisome | 45.21 | 43.71 |
| CDX75499 | Canola | cytosol, nucleus, peroxisome | 44.86 | 43.38 |
| VIT_18s0122g00590.t01 | Wine grape | endoplasmic reticulum, plasma membrane | 46.92 | 43.35 |
| KXG19929 | Sorghum | nucleus | 46.92 | 43.08 |
| TraesCS7A01G225700.1 | Wheat | nucleus | 46.92 | 42.41 |
| HORVU7Hr1G046930.1 | Barley | cytosol, nucleus, peroxisome | 45.55 | 42.09 |
| TraesCS7B01G193900.1 | Wheat | cytosol, nucleus, peroxisome | 46.23 | 41.93 |
| CDX90445 | Canola | plastid | 39.04 | 41.61 |
| TraesCS7D01G228800.1 | Wheat | nucleus | 44.86 | 41.2 |
| CDY53650 | Canola | plastid | 35.96 | 40.38 |
| CDX79838 | Canola | plastid | 35.96 | 40.38 |
| Os06t0326900-01 | Rice | nucleus | 44.52 | 40.37 |
| CDX79599 | Canola | cytosol, peroxisome, plastid | 36.99 | 39.56 |
| CDY23160 | Canola | cytosol, nucleus, vacuole | 37.67 | 39.43 |
| CDY12779 | Canola | cytosol, nucleus, vacuole | 38.01 | 39.36 |
| CDY72485 | Canola | nucleus | 36.64 | 39.19 |
| CDX78802 | Canola | cytosol | 38.7 | 38.83 |
| CDY54780 | Canola | cytosol | 38.7 | 38.7 |
| CDY70947 | Canola | plastid | 34.59 | 38.7 |
| CDY59041 | Canola | cytosol, nucleus, peroxisome | 37.67 | 38.46 |
| CDY14862 | Canola | plastid | 34.25 | 38.31 |
| CDX74739 | Canola | nucleus | 40.41 | 38.06 |
| CDY64701 | Canola | nucleus | 40.41 | 37.94 |
| CDY49327 | Canola | cytosol, endoplasmic reticulum, nucleus | 40.75 | 37.9 |
| CDY18931 | Canola | nucleus | 40.07 | 37.86 |
| CDY41211 | Canola | plastid | 37.33 | 36.95 |
| CDY60321 | Canola | plastid | 37.33 | 36.82 |
| CDY68242 | Canola | plastid | 37.33 | 36.7 |
| CDY37040 | Canola | nucleus | 38.7 | 36.69 |
| CDY53687 | Canola | nucleus | 37.33 | 36.58 |
| Zm00001d046696_P001 | Maize | cytosol, nucleus, peroxisome | 33.9 | 36.53 |
| CDY27387 | Canola | nucleus | 38.7 | 36.22 |
| CDY21124 | Canola | cytosol, endoplasmic reticulum, peroxisome | 35.27 | 35.76 |
| EER88668 | Sorghum | cytosol | 32.88 | 35.56 |
| CDY30003 | Canola | cytosol, nucleus, peroxisome, plastid | 34.93 | 35.29 |
| CDY02949 | Canola | plastid | 36.99 | 35.18 |
| CDY41289 | Canola | nucleus | 37.67 | 34.92 |
| CDX82978 | Canola | cytosol, nucleus, plastid | 37.67 | 34.92 |
| CDX98771 | Canola | nucleus | 37.67 | 34.7 |
| CDX76085 | Canola | plastid | 35.96 | 34.2 |
| CDX94128 | Canola | nucleus | 38.01 | 33.95 |
| CDY21451 | Canola | cytosol | 28.42 | 33.88 |
| TraesCS7B01G297300.1 | Wheat | cytosol | 33.56 | 33.56 |
| CDX83182 | Canola | cytosol | 28.08 | 33.47 |
| CDX84222 | Canola | cytosol | 21.92 | 33.33 |
| CDY45266 | Canola | plastid | 23.29 | 33.17 |
| TraesCS7A01G395400.1 | Wheat | cytosol | 32.53 | 32.87 |
| CDY04391 | Canola | nucleus | 36.64 | 32.72 |
| CDY31677 | Canola | cytosol | 21.58 | 31.98 |
| HORVU7Hr1G093230.2 | Barley | cytosol | 31.51 | 30.36 |
| CDY65376 | Canola | nucleus | 24.66 | 26.18 |
Protein Annotations
| Gene3D:3.30.1330.80 | MapMan:35.1 | UniProt:A0A078H9Y6 | InterPro:AT-hook_nuclear | EnsemblPlants:CDY33658 | ProteinID:CDY33658 |
| ProteinID:CDY33658.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003680 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| EnsemblPlantsGene:GSBRNA2T00055021001 | InterPro:IPR005175 | PFAM:PF03479 | PIRSF:PIRSF016021 | InterPro:PPC_dom | PFscan:PS51742 |
| PANTHER:PTHR31100 | PANTHER:PTHR31100:SF43 | SUPFAM:SSF117856 | UniParc:UPI0004EF43EA | SEG:seg | : |
Description
BnaC08g19580DAT-hook motif nuclear-localized protein [Source:UniProtKB/TrEMBL;Acc:A0A078H9Y6]
Coordinates
chrLK032319:+:271860..272810
Molecular Weight (calculated)
30685.6 Da
IEP (calculated)
7.268
GRAVY (calculated)
-0.732
Length
292 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGGYEQGGG ASRYFYNLFR PEIHHQQQLQ PQGGINLFDQ HHHQQQQHQQ QEQQQPSHDS RESDHSNKDH HHQTGRPDSD PATSSSAPGK RPRGRPPGSK
101: NKPKAPIIVT RDSPNTLRSH VLEVSPGADI VESLSTYARR RGRGISVLGG NGTVSNVTLR QPVTPAGGVV TLHGRFEILS LTGTVLPPPA PPGAGGSVVA
201: PLVASAPVIL MAASFSNAVF ERLPIEEEEE EGGGGGGGGG EPPQMQQAPS ASPPSGVTGQ GQLGGNVGGY GFSGDPHLLG WRAGTPSRPP FN
101: NKPKAPIIVT RDSPNTLRSH VLEVSPGADI VESLSTYARR RGRGISVLGG NGTVSNVTLR QPVTPAGGVV TLHGRFEILS LTGTVLPPPA PPGAGGSVVA
201: PLVASAPVIL MAASFSNAVF ERLPIEEEEE EGGGGGGGGG EPPQMQQAPS ASPPSGVTGQ GQLGGNVGGY GFSGDPHLLG WRAGTPSRPP FN
001: MEGGYEQGGG ASRYFHNLFR PEIHHQQLQP QGGINLIDQH HHQHQQHQQQ QQPSDDSRES DHSNKDHHQQ GRPDSDPNTS SSAPGKRPRG RPPGSKNKAK
101: PPIIVTRDSP NALRSHVLEV SPGADIVESV STYARRRGRG VSVLGGNGTV SNVTLRQPVT PGNGGGVSGG GGVVTLHGRF EILSLTGTVL PPPAPPGAGG
201: LSIFLAGGQG QVVGGSVVAP LIASAPVILM AASFSNAVFE RLPIEEEEEE GGGGGGGGGG GPPQMQQAPS ASPPSGVTGQ GQLGGNVGGY GFSGDPHLLG
301: WGAGTPSRPP F
101: PPIIVTRDSP NALRSHVLEV SPGADIVESV STYARRRGRG VSVLGGNGTV SNVTLRQPVT PGNGGGVSGG GGVVTLHGRF EILSLTGTVL PPPAPPGAGG
201: LSIFLAGGQG QVVGGSVVAP LIASAPVILM AASFSNAVFE RLPIEEEEEE GGGGGGGGGG GPPQMQQAPS ASPPSGVTGQ GQLGGNVGGY GFSGDPHLLG
301: WGAGTPSRPP F
Arabidopsis Description
AHL27AT-hook motif nuclear-localized protein 27 [Source:UniProtKB/Swiss-Prot;Acc:Q9S7C9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.