Factsheet for Zm00001d051620_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

mitochondrion 3
cytosol 1
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d017825_P001	Maize	plastid	94.32	92.28
Zm00001d045928_P001	Maize	nucleus	65.62	67.97
GSMUA_Achr9P12320_001	Banana	plastid	58.68	66.19
Solyc04g082810.2.1	Tomato	cytosol, nucleus, peroxisome	45.74	59.18
PGSC0003DMT400025705	Potato	plastid	47.32	57.69
KRH51551	Soybean	plastid	36.28	56.37
CDY20404	Canola	nucleus	47.32	55.35
CDX87591	Canola	nucleus	48.58	55.0
CDX96613	Canola	nucleus	51.1	53.82
CDY45983	Canola	nucleus	48.9	53.82
Bra008262.1-P	Field mustard	nucleus	48.27	53.31
Bra015738.1-P	Field mustard	nucleus	48.27	53.12
CDX88286	Canola	cytosol, endoplasmic reticulum, nucleus	45.74	52.54
AT1G20900.1	Thale cress	nucleus	51.42	52.41
CDY31511	Canola	nucleus	44.16	52.04
Zm00001d018508_P001	Maize	cytosol	40.06	51.84
Bra016444.1-P	Field mustard	nucleus	51.42	51.75
Bra012256.1-P	Field mustard	nucleus	50.16	51.46
Zm00001d031887_P001	Maize	nucleus	43.53	51.3
CDY01347	Canola	nucleus	43.53	50.74
CDY33658	Canola	nucleus	46.69	50.68
AT1G76500.1	Thale cress	nucleus	48.27	50.66
Zm00001d049906_P001	Maize	nucleus	41.96	50.19
CDY29494	Canola	nucleus	43.22	50.0
CDY31858	Canola	nucleus	42.9	49.82
Bra003717.1-P	Field mustard	nucleus	44.8	49.48
Zm00001d046696_P001	Maize	cytosol, nucleus, peroxisome	41.96	49.08
Bra025854.1-P	Field mustard	nucleus	44.16	48.95
CDX68095	Canola	cytosol	41.64	48.89
VIT_18s0122g00590.t01	Wine grape	endoplasmic reticulum, plasma membrane	48.58	48.73
Zm00001d024537_P001	Maize	cytosol, endoplasmic reticulum, nucleus	43.85	47.77
CDX85952	Canola	cytosol	40.69	47.43
Zm00001d026035_P001	Maize	cytosol, nucleus, peroxisome	45.74	46.77
Zm00001d002495_P001	Maize	cytosol, nucleus, peroxisome	45.43	46.6
Zm00001d049521_P001	Maize	cytosol, endoplasmic reticulum, peroxisome	42.59	45.15
Zm00001d016132_P001	Maize	nucleus	43.53	44.66
Zm00001d028577_P001	Maize	nucleus	38.17	44.32
Zm00001d053429_P001	Maize	nucleus	44.16	43.75
Zm00001d036088_P001	Maize	extracellular	38.49	43.57
Zm00001d039249_P001	Maize	cytosol	20.82	42.58
Zm00001d045427_P001	Maize	cytosol, nucleus, plasma membrane	44.8	41.64
Zm00001d009031_P001	Maize	mitochondrion, plastid	24.61	38.42
Zm00001d042060_P001	Maize	plastid	28.08	36.33
Zm00001d031826_P001	Maize	cytosol, endoplasmic reticulum, nucleus	31.23	33.67
Zm00001d020768_P001	Maize	cytosol	31.55	30.03
Zm00001d005923_P001	Maize	nucleus	31.55	29.07

Protein Annotations

EntrezGene:100384452	Gene3D:3.30.1330.80	MapMan:35.1	UniProt:A0A1D6Q8H7	ProteinID:AQK54708.1	InterPro:AT-hook_nuclear
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003680	GO:GO:0003700	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR005175
PFAM:PF03479	PIRSF:PIRSF016021	InterPro:PPC_dom	PFscan:PS51742	PANTHER:PTHR31100	PANTHER:PTHR31100:SF5
SUPFAM:SSF117856	UniParc:UPI00078B1709	EnsemblPlantsGene:Zm00001d051620	EnsemblPlants:Zm00001d051620_P001	EnsemblPlants:Zm00001d051620_T001	SEG:seg

Description

AT-hook motif nuclear-localized protein 29

Coordinates

chr4:-:164924661..164925614

Molecular Weight (calculated)

31474.1 Da

IEP (calculated)

6.515

GRAVY (calculated)

-0.250

Length

317 amino acids

Sequence
(BLAST)

001: MPGMDPGGGG SSRYFHQLLR PQQQQPSPLS PNSHVKMEHH RMSPDKSPVV GEADAGGSGA GGDQPSSSAM VPVEGGGSGT GTPTRRPRGR PAGSKNKPKP
101: PIIVTRDSPN ALHSHVLEVA AGADVVDCVA EFARRRGRGV CVLSGGGAVA NVALRQPGAS PPGSMVATLR GRLEILSLTG TVLPPPAPPG ASGLTVFLSG
201: GQGQVVGGSV VGPLVAAGPV VLMAASFANA VYERLPLEGE EEEDETAAGA AGAEPQDQVA QSSAGPPGQQ PTASQSSGVT GGDAGMSLYN LAGNVGAYQL
301: PGDSLGGWSG GGVRPPF

Best Arabidopsis Sequence Match ( AT1G20900.1 )
(BLAST)

001: MEGGYEQGGG ASRYFHNLFR PEIHHQQLQP QGGINLIDQH HHQHQQHQQQ QQPSDDSRES DHSNKDHHQQ GRPDSDPNTS SSAPGKRPRG RPPGSKNKAK
101: PPIIVTRDSP NALRSHVLEV SPGADIVESV STYARRRGRG VSVLGGNGTV SNVTLRQPVT PGNGGGVSGG GGVVTLHGRF EILSLTGTVL PPPAPPGAGG
201: LSIFLAGGQG QVVGGSVVAP LIASAPVILM AASFSNAVFE RLPIEEEEEE GGGGGGGGGG GPPQMQQAPS ASPPSGVTGQ GQLGGNVGGY GFSGDPHLLG
301: WGAGTPSRPP F

Arabidopsis Description

AHL27AT-hook motif nuclear-localized protein 27 [Source:UniProtKB/Swiss-Prot;Acc:Q9S7C9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.