Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES04848 | Sorghum | nucleus | 93.53 | 88.38 |
| Zm00001d053429_P001 | Maize | nucleus | 89.97 | 86.88 |
| Os02t0448000-00 | Rice | nucleus | 86.41 | 84.49 |
| TraesCS6A01G176200.1 | Wheat | nucleus | 82.85 | 82.85 |
| HORVU6Hr1G037630.1 | Barley | nucleus | 82.52 | 82.52 |
| TraesCS6D01G167600.1 | Wheat | nucleus | 82.52 | 82.52 |
| HORVU6Hr1G037640.1 | Barley | nucleus | 82.52 | 82.52 |
| TraesCS6B01G209300.1 | Wheat | nucleus | 82.2 | 82.2 |
| Solyc06g060500.1.1 | Tomato | nucleus | 46.28 | 65.0 |
| PGSC0003DMT400045315 | Potato | nucleus | 45.95 | 64.25 |
| KRH57320 | Soybean | nucleus | 55.34 | 60.42 |
| VIT_02s0025g05100.t01 | Wine grape | nucleus | 58.58 | 59.93 |
| KRH04051 | Soybean | nucleus | 55.02 | 59.23 |
| Solyc08g079720.2.1 | Tomato | nucleus | 55.66 | 58.9 |
| KRH28008 | Soybean | nucleus | 56.63 | 58.72 |
| PGSC0003DMT400010004 | Potato | nucleus | 55.02 | 58.02 |
| KRH77431 | Soybean | nucleus | 55.99 | 57.67 |
| PGSC0003DMT400032509 | Potato | nucleus | 54.69 | 54.34 |
| Solyc08g007560.1.1 | Tomato | nucleus | 55.34 | 53.6 |
| Zm00001d018508_P001 | Maize | cytosol | 41.75 | 52.65 |
| Zm00001d024537_P001 | Maize | cytosol, endoplasmic reticulum, nucleus | 49.51 | 52.58 |
| Zm00001d031887_P001 | Maize | nucleus | 45.31 | 52.04 |
| Zm00001d026035_P001 | Maize | cytosol, nucleus, peroxisome | 51.78 | 51.61 |
| Zm00001d049906_P001 | Maize | nucleus | 44.01 | 51.32 |
| Zm00001d049521_P001 | Maize | cytosol, endoplasmic reticulum, peroxisome | 49.51 | 51.17 |
| Zm00001d002495_P001 | Maize | cytosol, nucleus, peroxisome | 51.13 | 51.13 |
| Zm00001d039249_P001 | Maize | cytosol | 22.98 | 45.81 |
| Zm00001d045427_P001 | Maize | cytosol, nucleus, plasma membrane | 50.16 | 45.45 |
| Zm00001d036088_P001 | Maize | extracellular | 39.81 | 43.93 |
| Zm00001d028577_P001 | Maize | nucleus | 38.51 | 43.59 |
| Zm00001d051620_P001 | Maize | plastid | 44.66 | 43.53 |
| Zm00001d017825_P001 | Maize | plastid | 44.66 | 42.59 |
| Zm00001d046696_P001 | Maize | cytosol, nucleus, peroxisome | 35.92 | 40.96 |
| Zm00001d045928_P001 | Maize | nucleus | 40.45 | 40.85 |
| Zm00001d009031_P001 | Maize | mitochondrion, plastid | 25.57 | 38.92 |
| Zm00001d042060_P001 | Maize | plastid | 28.16 | 35.51 |
| Zm00001d031826_P001 | Maize | cytosol, endoplasmic reticulum, nucleus | 28.16 | 29.59 |
| Zm00001d020768_P001 | Maize | cytosol | 28.8 | 26.73 |
| Zm00001d005923_P001 | Maize | nucleus | 28.8 | 25.87 |
Protein Annotations
| EMBL:BT040893 | EMBL:BT043112 | EnsemblPlants:Zm00001d016132_P001 | EnsemblPlants:Zm00001d016132_T001 | EnsemblPlantsGene:Zm00001d016132 | EntrezGene:100273351 |
| Gene3D:3.30.1330.80 | InterPro:IPR005175 | InterPro:PPC_dom | PANTHER:PTHR31100 | PANTHER:PTHR31100:SF15 | PFAM:PF03479 |
| PFscan:PS51742 | ProteinID:AQK70106.1 | SEG:seg | SUPFAM:SSF117856 | UniParc:UPI00017B7EA7 | UniProt:B4FUV5 |
| MapMan:35.1 | : | : | : | : | : |
Description
AT-hook motif nuclear-localized protein 26
Coordinates
chr5:-:145909442..145910371
Molecular Weight (calculated)
31551.2 Da
IEP (calculated)
6.508
GRAVY (calculated)
-0.261
Length
309 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPVAASIHG HHLPPPFNTR DFHHHLQQQQ QQLKTEDDHG SGAPGLFGSR GTKGDHENND QNSGNSNGSG GGGGDELALV PPSGAGPEGG EPTLRRPKGR
101: PAGSKNKPKP PIIITRDSAN TLRTHVMEVA SGCDISESIT AFARRRQRGV CVLSGAGTVT NVTLRQPASQ GAVVALHGRF EILSLSGSFL PPPAPPEATG
201: LTVYLAGGQG QVVGGSVVGA LTAAGPVVIM AASFANAVYE RLPLEEDDML AAQAQADSAG ILAGAQLAGA VDPSLFQGLP PNLMCNVQMP PEAAYGWSPG
301: AAGGRPAPF
101: PAGSKNKPKP PIIITRDSAN TLRTHVMEVA SGCDISESIT AFARRRQRGV CVLSGAGTVT NVTLRQPASQ GAVVALHGRF EILSLSGSFL PPPAPPEATG
201: LTVYLAGGQG QVVGGSVVGA LTAAGPVVIM AASFANAVYE RLPLEEDDML AAQAQADSAG ILAGAQLAGA VDPSLFQGLP PNLMCNVQMP PEAAYGWSPG
301: AAGGRPAPF
001: MDQVSRSLPP PFLSRDLHLH PHHQFQHQQQ QQQQNHGHDI DQHRIGGLKR DRDADIDPNE HSSAGKDQST PGSGGESGGG GGGDNHITRR PRGRPAGSKN
101: KPKPPIIITR DSANALKSHV MEVANGCDVM ESVTVFARRR QRGICVLSGN GAVTNVTIRQ PASVPGGGSS VVNLHGRFEI LSLSGSFLPP PAPPAASGLT
201: IYLAGGQGQV VGGSVVGPLM ASGPVVIMAA SFGNAAYERL PLEEDDQEEQ TAGAVANNID GNATMGGGTQ TQTQTQQQQQ QQLMQDPTSF IQGLPPNLMN
301: SVQLPAEAYW GTPRPSF
101: KPKPPIIITR DSANALKSHV MEVANGCDVM ESVTVFARRR QRGICVLSGN GAVTNVTIRQ PASVPGGGSS VVNLHGRFEI LSLSGSFLPP PAPPAASGLT
201: IYLAGGQGQV VGGSVVGPLM ASGPVVIMAA SFGNAAYERL PLEEDDQEEQ TAGAVANNID GNATMGGGTQ TQTQTQQQQQ QQLMQDPTSF IQGLPPNLMN
301: SVQLPAEAYW GTPRPSF
Arabidopsis Description
AHL22AT-hook motif nuclear-localized protein [Source:UniProtKB/TrEMBL;Acc:A0A178VXD2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.