Factsheet for Zm00001d049521_P001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, cytosol, peroxisome

Predictor Summary:

cytosol 1
mitochondrion 1
endoplasmic reticulum 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, endoplasmic reticulum, peroxisome
Any Predictor:	cytosol, mitochondrion, peroxisome
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	endoplasmic reticulum
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG24494	Sorghum	nucleus	89.97	90.27
Zm00001d024537_P001	Maize	cytosol, endoplasmic reticulum, nucleus	87.29	89.69
Os08t0159700-01	Rice	cytosol	82.27	85.12
TraesCS7A01G299100.1	Wheat	cytosol, nucleus, plastid	79.6	83.8
TraesCS7B01G187300.1	Wheat	cytosol, nucleus, peroxisome	79.6	83.8
TraesCS7D01G294700.1	Wheat	cytosol, nucleus, peroxisome	79.26	83.45
HORVU7Hr1G070490.2	Barley	cytosol, mitochondrion, peroxisome	77.59	80.56
GSMUA_Achr9P23390_001	Banana	plastid	57.19	67.32
GSMUA_Achr3P27580_001	Banana	cytosol, nucleus, plastid	49.5	58.96
Zm00001d002495_P001	Maize	cytosol, nucleus, peroxisome	58.86	56.96
Zm00001d026035_P001	Maize	cytosol, nucleus, peroxisome	58.53	56.45
Zm00001d016132_P001	Maize	nucleus	51.17	49.51
Zm00001d053429_P001	Maize	nucleus	52.84	49.38
Zm00001d018508_P001	Maize	cytosol	40.13	48.98
Zm00001d031887_P001	Maize	nucleus	42.81	47.58
Zm00001d049906_P001	Maize	nucleus	41.81	47.17
Zm00001d039249_P001	Maize	cytosol	24.08	46.45
Zm00001d036088_P001	Maize	extracellular	42.47	45.36
Zm00001d045427_P001	Maize	cytosol, nucleus, plasma membrane	50.17	43.99
Zm00001d017825_P001	Maize	plastid	46.82	43.21
Zm00001d051620_P001	Maize	plastid	45.15	42.59
Zm00001d046696_P001	Maize	cytosol, nucleus, peroxisome	37.46	41.33
Zm00001d009031_P001	Maize	mitochondrion, plastid	27.76	40.89
Zm00001d028577_P001	Maize	nucleus	37.12	40.66
Zm00001d045928_P001	Maize	nucleus	40.47	39.54
Zm00001d042060_P001	Maize	plastid	30.77	37.55
Zm00001d031826_P001	Maize	cytosol, endoplasmic reticulum, nucleus	31.1	31.63
Zm00001d020768_P001	Maize	cytosol	31.1	27.93
Zm00001d005923_P001	Maize	nucleus	31.44	27.33

Protein Annotations

EnsemblPlants:Zm00001d049521_P001	EnsemblPlants:Zm00001d049521_T001	EnsemblPlantsGene:Zm00001d049521	Gene3D:3.30.1330.80	InterPro:IPR005175	InterPro:PPC_dom
PANTHER:PTHR31100	PANTHER:PTHR31100:SF6	PFAM:PF03479	PFscan:PS51742	ProteinID:AQK50694.1	SEG:seg
SUPFAM:SSF117856	UniParc:UPI0008450E16	UniProt:A0A1D6PVU1	MapMan:35.1	:	:

Description

AT-hook motif nuclear-localized protein 21

Coordinates

chr4:-:33025851..33026750

Molecular Weight (calculated)

29526.9 Da

IEP (calculated)

6.415

GRAVY (calculated)

-0.048

Length

299 amino acids

Sequence
(BLAST)

001: MADLDLGASS YLHQQHHHQQ LLPLHLHHED GGGAAGGSDD GQDSLSPGSG GGGGPPSTAG GAGIGGGDVV ARRPRGRPPG SKNKPKPPVI ITRESANALR
101: AHILEVAAGC DVFEALTAYA RRRQRGVCVL SAAGTVANVT LRQPQSAQTG PAASAPAVAT LQGRFEILSL AGSFLPPPAP PGATSLAAFL AAGQGQVVGG
201: SVAGALIAAG PVVVVAASFS NVAYERLPLE EGDEVAPPPP PAGTDQQPAG MPFDPAAAAA AGGLPFFNLP LGMPPMPMDD HAGWPAGAPG GGVGRSPFS

Best Arabidopsis Sequence Match ( AT2G35270.1 )
(BLAST)

001: MAGLDLGTTS RYVHNVDGGG GGQFTTDNHH EDDGGAGGNH HHHHHNHNHH QGLDLIASND NSGLGGGGGG GSGDLVMRRP RGRPAGSKNK PKPPVIVTRE
101: SANTLRAHIL EVGSGCDVFE CISTYARRRQ RGICVLSGTG TVTNVSIRQP TAAGAVVTLR GTFEILSLSG SFLPPPAPPG ATSLTIFLAG AQGQVVGGNV
201: VGELMAAGPV MVMAASFTNV AYERLPLDEH EEHLQSGGGG GGGNMYSEAT GGGGGLPFFN LPMSMPQIGV ESWQGNHAGA GRAPF

Arabidopsis Description

AHL21AT-hook motif nuclear-localized protein 21 [Source:UniProtKB/Swiss-Prot;Acc:O82166]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.