Factsheet for Zm00001d024537_P001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, nucleus, cytosol

Predictor Summary:

cytosol 1
mitochondrion 1
endoplasmic reticulum 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, endoplasmic reticulum, nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	endoplasmic reticulum
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG24494	Sorghum	nucleus	91.75	89.6
Zm00001d049521_P001	Maize	cytosol, endoplasmic reticulum, peroxisome	89.69	87.29
Os08t0159700-01	Rice	cytosol	85.57	86.16
TraesCS7B01G187300.1	Wheat	cytosol, nucleus, peroxisome	81.79	83.8
TraesCS7A01G299100.1	Wheat	cytosol, nucleus, plastid	81.44	83.45
TraesCS7D01G294700.1	Wheat	cytosol, nucleus, peroxisome	81.44	83.45
HORVU7Hr1G070490.2	Barley	cytosol, mitochondrion, peroxisome	79.04	79.86
GSMUA_Achr9P23390_001	Banana	plastid	60.82	69.69
GSMUA_Achr3P27580_001	Banana	cytosol, nucleus, plastid	53.95	62.55
Zm00001d002495_P001	Maize	cytosol, nucleus, peroxisome	63.57	59.87
Zm00001d026035_P001	Maize	cytosol, nucleus, peroxisome	62.2	58.39
Zm00001d018508_P001	Maize	cytosol	42.27	50.2
Zm00001d053429_P001	Maize	nucleus	54.64	49.69
Zm00001d016132_P001	Maize	nucleus	52.58	49.51
Zm00001d049906_P001	Maize	nucleus	44.33	48.68
Zm00001d031887_P001	Maize	nucleus	44.67	48.33
Zm00001d039249_P001	Maize	cytosol	24.74	46.45
Zm00001d036088_P001	Maize	extracellular	42.27	43.93
Zm00001d051620_P001	Maize	plastid	47.77	43.85
Zm00001d017825_P001	Maize	plastid	48.45	43.52
Zm00001d045427_P001	Maize	cytosol, nucleus, plasma membrane	50.52	43.11
Zm00001d009031_P001	Maize	mitochondrion, plastid	29.21	41.87
Zm00001d028577_P001	Maize	nucleus	38.83	41.39
Zm00001d046696_P001	Maize	cytosol, nucleus, peroxisome	37.8	40.59
Zm00001d045928_P001	Maize	nucleus	42.27	40.2
Zm00001d042060_P001	Maize	plastid	31.96	37.96
Zm00001d031826_P001	Maize	cytosol, endoplasmic reticulum, nucleus	31.96	31.63
Zm00001d020768_P001	Maize	cytosol	32.65	28.53
Zm00001d005923_P001	Maize	nucleus	32.99	27.91

Protein Annotations

EntrezGene:103641260	Gene3D:3.30.1330.80	MapMan:35.1	UniProt:A0A1D6J025	ProteinID:AQK41451.1	InterPro:AT-hook_nuclear
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003680	GO:GO:0003700	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR005175
PFAM:PF03479	PIRSF:PIRSF016021	InterPro:PPC_dom	PFscan:PS51742	PANTHER:PTHR31100	PANTHER:PTHR31100:SF6
SUPFAM:SSF117856	UniParc:UPI0004DEA47D	EnsemblPlantsGene:Zm00001d024537	EnsemblPlants:Zm00001d024537_P001	EnsemblPlants:Zm00001d024537_T001	SEG:seg

Description

AT-hook motif nuclear-localized protein 21

Coordinates

chr10:+:76953148..76954023

Molecular Weight (calculated)

28734.0 Da

IEP (calculated)

7.408

GRAVY (calculated)

-0.073

Length

291 amino acids

Sequence
(BLAST)

001: MAGLDLGTSS YLHHHHHQSL HLHHEDGGGR AGGSDDGQDS LSPGSGGGGG APPSTIGGGG EVVGRRPRGR PPGSKNKPKP PVIITRESAN ALRAHILEVA
101: AGCDVFEALT AYARRRQRGV CVLSAAGTVA NVTLRQPQSS QAGPASPAVA TLHGRFEILS LAGSFLPPPA PPGATSLAAF LAGGQGQVVG GSVAGALIAA
201: GPVVVVAASF SNVAYERLPL EDGDEVAPPP PAGADQQQPG GVPFDPAAAA ASAGLPFFNL PLGMPPMPMV GHGGWPAGSP GGAGVGRPPF S

Best Arabidopsis Sequence Match ( AT1G76500.1 )
(BLAST)

001: MDGGYDQSGG ASRYFHNLFR PELHHQLQPQ PQLHPLPQPQ PQPQPQQQNS DDESDSNKDP GSDPVTSGST GKRPRGRPPG SKNKPKPPVI VTRDSPNVLR
101: SHVLEVSSGA DIVESVTTYA RRRGRGVSIL SGNGTVANVS LRQPATTAAH GANGGTGGVV ALHGRFEILS LTGTVLPPPA PPGSGGLSIF LSGVQGQVIG
201: GNVVAPLVAS GPVILMAASF SNATFERLPL EDEGGEGGEG GEVGEGGGGE GGPPPATSSS PPSGAGQGQL RGNMSGYDQF AGDPHLLGWG AAAAAAPPRP
301: AF

Arabidopsis Description

AHL29AT-hook motif nuclear-localized protein 29 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9K7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.