Factsheet for TraesCS7A01G299100.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

cytosol 1
mitochondrion 1
nucleus 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plastid
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G294700.1	Wheat	cytosol, nucleus, peroxisome	98.24	98.24
TraesCS7B01G187300.1	Wheat	cytosol, nucleus, peroxisome	97.89	97.89
HORVU7Hr1G070490.2	Barley	cytosol, mitochondrion, peroxisome	93.66	92.36
Os08t0159700-01	Rice	cytosol	86.97	85.47
Zm00001d024537_P001	Maize	cytosol, endoplasmic reticulum, nucleus	83.45	81.44
KXG24494	Sorghum	nucleus	84.86	80.87
Zm00001d049521_P001	Maize	cytosol, endoplasmic reticulum, peroxisome	83.8	79.6
GSMUA_Achr9P23390_001	Banana	plastid	58.8	65.75
GSMUA_Achr3P27580_001	Banana	cytosol, nucleus, plastid	53.17	60.16
TraesCS2A01G449300.1	Wheat	cytosol, nucleus, peroxisome	61.97	55.87
TraesCS6A01G176200.1	Wheat	nucleus	53.52	49.19
TraesCS4A01G094700.1	Wheat	cytosol, nucleus, plastid	42.96	47.66
TraesCS6A01G053800.1	Wheat	nucleus	44.01	44.33
TraesCS4A01G312400.1	Wheat	nucleus	44.37	44.21
TraesCS6A01G399200.1	Wheat	cytosol, extracellular, peroxisome	45.07	44.14
TraesCS3A01G167300.1	Wheat	plastid	30.99	41.31
TraesCS6A01G277700.1	Wheat	plastid	47.18	40.98
TraesCS7A01G225700.1	Wheat	nucleus	45.77	40.25
TraesCS1A01G043100.1	Wheat	mitochondrion, nucleus	45.77	40.12
TraesCS7A01G076500.1	Wheat	cytosol, endoplasmic reticulum, nucleus	47.89	39.31
TraesCS4A01G374700.1	Wheat	nucleus	47.18	38.07
TraesCS7A01G395400.1	Wheat	cytosol	35.92	35.29
TraesCS3A01G490800.1	Wheat	cytosol	30.99	31.21
TraesCS5A01G245800.1	Wheat	cytosol, endoplasmic reticulum, nucleus	34.51	28.82

Protein Annotations

EnsemblPlants:TraesCS7A01G299100.1	EnsemblPlantsGene:TraesCS7A01G299100	Gene3D:3.30.1330.80	InterPro:AT-hook_nuclear	InterPro:IPR005175	InterPro:PPC_dom
PANTHER:PTHR31100	PANTHER:PTHR31100:SF6	PFAM:PF03479	PFscan:PS51742	PIRSF:PIRSF016021	SEG:seg
SUPFAM:SSF117856	TIGR:cd11378	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr7A:+:408688442..408689296

Molecular Weight (calculated)

28188.3 Da

IEP (calculated)

6.720

GRAVY (calculated)

-0.090

Length

284 amino acids

Sequence
(BLAST)

001: MAGLDLGTNS YLHHHQQLHL RHDDGAGGSD DGQDALSPGG GGGSAAAGAG IGGSEVVGRR PRGRPPGSKN KPKPPVIITR ESANALRAHI LEVAAGCDVF
101: EALTAYARRR QRGVCVLSAA GTVTNVTLRQ PQSAQSGPAS PAVATLHGRF EILSLAGSFL PPPAPPGATS LSAFLAGGQG QVVGGSVAGA LVAAGPVVVV
201: ASSFSNVAYE RLPLEDGDEV VPTPPPAGSD QAGGGMPFGV DPSGGSTGAG LQFFNLPMGM PPMPVDGHNG WPGAAGGVER PPFS

Best Arabidopsis Sequence Match ( AT1G76500.1 )
(BLAST)

001: MDGGYDQSGG ASRYFHNLFR PELHHQLQPQ PQLHPLPQPQ PQPQPQQQNS DDESDSNKDP GSDPVTSGST GKRPRGRPPG SKNKPKPPVI VTRDSPNVLR
101: SHVLEVSSGA DIVESVTTYA RRRGRGVSIL SGNGTVANVS LRQPATTAAH GANGGTGGVV ALHGRFEILS LTGTVLPPPA PPGSGGLSIF LSGVQGQVIG
201: GNVVAPLVAS GPVILMAASF SNATFERLPL EDEGGEGGEG GEVGEGGGGE GGPPPATSSS PPSGAGQGQL RGNMSGYDQF AGDPHLLGWG AAAAAAPPRP
301: AF

Arabidopsis Description

AHL29AT-hook motif nuclear-localized protein 29 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9K7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.