Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 8
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G173400.1 | Wheat | plastid | 98.12 | 98.12 |
| TraesCS3B01G198900.1 | Wheat | plastid | 96.24 | 97.62 |
| HORVU3Hr1G033710.2 | Barley | plastid | 96.71 | 96.71 |
| Zm00001d039249_P001 | Maize | cytosol | 55.87 | 76.77 |
| EER99980 | Sorghum | plastid | 67.61 | 68.25 |
| Os01t0246601-00 | Rice | plastid | 72.77 | 67.98 |
| Zm00001d009031_P001 | Maize | mitochondrion, plastid | 61.97 | 65.02 |
| TraesCS4A01G094700.1 | Wheat | cytosol, nucleus, plastid | 38.03 | 31.64 |
| TraesCS7A01G299100.1 | Wheat | cytosol, nucleus, plastid | 41.31 | 30.99 |
| TraesCS6A01G053800.1 | Wheat | nucleus | 38.5 | 29.08 |
| TraesCS4A01G312400.1 | Wheat | nucleus | 38.5 | 28.77 |
| TraesCS2A01G449300.1 | Wheat | cytosol, nucleus, peroxisome | 40.85 | 27.62 |
| TraesCS6A01G399200.1 | Wheat | cytosol, extracellular, peroxisome | 37.09 | 27.24 |
| TraesCS6A01G176200.1 | Wheat | nucleus | 38.97 | 26.86 |
| TraesCS7A01G395400.1 | Wheat | cytosol | 35.68 | 26.3 |
| TraesCS3A01G490800.1 | Wheat | cytosol | 34.74 | 26.24 |
| TraesCS7A01G076500.1 | Wheat | cytosol, endoplasmic reticulum, nucleus | 40.85 | 25.14 |
| TraesCS4A01G374700.1 | Wheat | nucleus | 40.85 | 24.72 |
| TraesCS6A01G277700.1 | Wheat | plastid | 37.56 | 24.46 |
| TraesCS1A01G043100.1 | Wheat | mitochondrion, nucleus | 37.09 | 24.38 |
| TraesCS7A01G225700.1 | Wheat | nucleus | 36.62 | 24.15 |
| TraesCS5A01G245800.1 | Wheat | cytosol, endoplasmic reticulum, nucleus | 35.68 | 22.35 |
Protein Annotations
| EnsemblPlants:TraesCS3A01G167300.1 | EnsemblPlantsGene:TraesCS3A01G167300 | Gene3D:3.30.1330.80 | InterPro:AT-hook_nuclear | InterPro:IPR005175 | InterPro:PPC_dom |
| PANTHER:PTHR31100 | PANTHER:PTHR31100:SF11 | PFAM:PF03479 | PFscan:PS51742 | PIRSF:PIRSF016021 | SEG:seg |
| SUPFAM:SSF117856 | TIGR:cd11378 | TMHMM:TMhelix | MapMan:35.2 | : | : |
Description
No Description!
Coordinates
chr3A:+:173942316..173942957
Molecular Weight (calculated)
21375.1 Da
IEP (calculated)
9.705
GRAVY (calculated)
0.314
Length
213 amino acids
Sequence
(BLAST)
(BLAST)
001: MGMATAAAAT TAAPDKLRQP CRPRPAAQIS SSKNRGPKAP VVIAHECPSA MRAHVLEVPA GRDVLSCVAA FARRGRCGAL VLGAAGHVAD VVLREPALVL
101: RGTTEILSLA GCFFPSPSAS AAGVAVFLAG PRGSVLGGAV AEGGLVAAGP VVVMVATFVA AAIDRLPLVK GDESSKADGS DVHGVAGQWR CGGQPLQQQC
201: GWAPLCRKLG AKS
101: RGTTEILSLA GCFFPSPSAS AAGVAVFLAG PRGSVLGGAV AEGGLVAAGP VVVMVATFVA AAIDRLPLVK GDESSKADGS DVHGVAGQWR CGGQPLQQQC
201: GWAPLCRKLG AKS
001: MAGGTALTPT SVGSKSVPMR NHEATERGNT NNNLRALPKA VQPVSSIEGE MAKRPRGRPA GSKNKPKPPI IVTHDSPNSL RANAVEISSG CDICETLSDF
101: ARRKQRGLCI LSANGCVTNV TLRQPASSGA IVTLHGRYEI LSLLGSILPP PAPLGITGLT IYLAGPQGQV VGGGVVGGLI ASGPVVLMAA SFMNAVFDRL
201: PMDDDEAASM QNQQYYQNGR SRPLDDIHGL PQNLLTNGNS ASDIYSWGPA QRVMSKP
101: ARRKQRGLCI LSANGCVTNV TLRQPASSGA IVTLHGRYEI LSLLGSILPP PAPLGITGLT IYLAGPQGQV VGGGVVGGLI ASGPVVLMAA SFMNAVFDRL
201: PMDDDEAASM QNQQYYQNGR SRPLDDIHGL PQNLLTNGNS ASDIYSWGPA QRVMSKP
Arabidopsis Description
AHL16AT-hook motif nuclear-localized protein [Source:UniProtKB/TrEMBL;Acc:A0A178VQG3]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.