Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G043600.1 | Wheat | mitochondrion | 98.77 | 98.77 |
| TraesCS1B01G056000.1 | Wheat | mitochondrion | 98.15 | 97.85 |
| HORVU1Hr1G008650.1 | Barley | mitochondrion, nucleus, peroxisome | 95.68 | 96.27 |
| HORVU7Hr1G020390.1 | Barley | mitochondrion | 51.54 | 88.36 |
| HORVU4Hr1G015750.1 | Barley | mitochondrion | 70.99 | 82.73 |
| TraesCS4A01G094700.1 | Wheat | cytosol, nucleus, plastid | 48.15 | 60.94 |
| TraesCS6A01G053800.1 | Wheat | nucleus | 46.3 | 53.19 |
| TraesCS4A01G312400.1 | Wheat | nucleus | 45.06 | 51.23 |
| TraesCS6A01G399200.1 | Wheat | cytosol, extracellular, peroxisome | 44.75 | 50.0 |
| TraesCS7A01G299100.1 | Wheat | cytosol, nucleus, plastid | 40.12 | 45.77 |
| TraesCS6A01G176200.1 | Wheat | nucleus | 41.05 | 43.04 |
| TraesCS2A01G449300.1 | Wheat | cytosol, nucleus, peroxisome | 41.67 | 42.86 |
| TraesCS6A01G277700.1 | Wheat | plastid | 43.21 | 42.81 |
| TraesCS7A01G225700.1 | Wheat | nucleus | 39.81 | 39.94 |
| TraesCS7A01G395400.1 | Wheat | cytosol | 34.26 | 38.41 |
| TraesCS7A01G076500.1 | Wheat | cytosol, endoplasmic reticulum, nucleus | 40.12 | 37.57 |
| TraesCS3A01G167300.1 | Wheat | plastid | 24.38 | 37.09 |
| TraesCS4A01G374700.1 | Wheat | nucleus | 40.12 | 36.93 |
| TraesCS3A01G490800.1 | Wheat | cytosol | 26.54 | 30.5 |
| TraesCS5A01G245800.1 | Wheat | cytosol, endoplasmic reticulum, nucleus | 31.79 | 30.29 |
Protein Annotations
| EnsemblPlants:TraesCS1A01G043100.1 | EnsemblPlantsGene:TraesCS1A01G043100 | Gene3D:3.30.1330.80 | InterPro:IPR005175 | InterPro:PPC_dom | PANTHER:PTHR31100 |
| PANTHER:PTHR31100:SF13 | PFAM:PF03479 | PFscan:PS51742 | SEG:seg | SUPFAM:SSF117856 | TIGR:cd11378 |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr1A:+:23856728..23857702
Molecular Weight (calculated)
31780.3 Da
IEP (calculated)
6.353
GRAVY (calculated)
-0.173
Length
324 amino acids
Sequence
(BLAST)
(BLAST)
001: MAWWAGSMGG LDLRNHLAQF GGPAPAGGAA MGGAEQAPTT PNSSGSNNHD DSSGAAQDSP TAGAGDNSPN PNAAISGSGP SGGGSGGGGS SSGRRPRGRP
101: AGSKNKPKPP IIITRESPNT LRSHVLEIAS GADIMDAVAT FARRRQRGVS VLSGSGVVGN VTLRQPAAPP GSVVTLHGRF EILSLSGAFL PSPCPPGATG
201: LAVYLAGGQG QVVGGTVIGE LVASGPVMVI AATFSNATYE RLPLADEELG EAAAAATGSD GMQLPDGPAP GGNGGMGAAV GVPGLPDPSS MPFYNLPPNL
301: QMPNGGGQMA HDVFGSFRPP PPAF
101: AGSKNKPKPP IIITRESPNT LRSHVLEIAS GADIMDAVAT FARRRQRGVS VLSGSGVVGN VTLRQPAAPP GSVVTLHGRF EILSLSGAFL PSPCPPGATG
201: LAVYLAGGQG QVVGGTVIGE LVASGPVMVI AATFSNATYE RLPLADEELG EAAAAATGSD GMQLPDGPAP GGNGGMGAAV GVPGLPDPSS MPFYNLPPNL
301: QMPNGGGQMA HDVFGSFRPP PPAF
001: MDGGYDQSGG ASRYFHNLFR PELHHQLQPQ PQLHPLPQPQ PQPQPQQQNS DDESDSNKDP GSDPVTSGST GKRPRGRPPG SKNKPKPPVI VTRDSPNVLR
101: SHVLEVSSGA DIVESVTTYA RRRGRGVSIL SGNGTVANVS LRQPATTAAH GANGGTGGVV ALHGRFEILS LTGTVLPPPA PPGSGGLSIF LSGVQGQVIG
201: GNVVAPLVAS GPVILMAASF SNATFERLPL EDEGGEGGEG GEVGEGGGGE GGPPPATSSS PPSGAGQGQL RGNMSGYDQF AGDPHLLGWG AAAAAAPPRP
301: AF
101: SHVLEVSSGA DIVESVTTYA RRRGRGVSIL SGNGTVANVS LRQPATTAAH GANGGTGGVV ALHGRFEILS LTGTVLPPPA PPGSGGLSIF LSGVQGQVIG
201: GNVVAPLVAS GPVILMAASF SNATFERLPL EDEGGEGGEG GEVGEGGGGE GGPPPATSSS PPSGAGQGQL RGNMSGYDQF AGDPHLLGWG AAAAAAPPRP
301: AF
Arabidopsis Description
AHL29AT-hook motif nuclear-localized protein 29 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9K7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.