Factsheet for TraesCS3A01G490800.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G551700.1	Wheat	cytosol	94.68	89.6
TraesCS3D01G496700.1	Wheat	cytosol	93.97	88.33
OQU88209	Sorghum	peroxisome	57.09	64.4
HORVU3Hr1G108820.1	Barley	mitochondrion	57.45	63.28
Os01t0953801-00	Rice	nucleus	57.45	61.13
Zm00001d042060_P001	Maize	plastid	51.42	59.18
TraesCS4A01G094700.1	Wheat	cytosol, nucleus, plastid	32.98	36.33
TraesCS3A01G167300.1	Wheat	plastid	26.24	34.74
TraesCS6A01G053800.1	Wheat	nucleus	32.98	32.98
TraesCS4A01G312400.1	Wheat	nucleus	31.91	31.58
TraesCS7A01G299100.1	Wheat	cytosol, nucleus, plastid	31.21	30.99
TraesCS6A01G399200.1	Wheat	cytosol, extracellular, peroxisome	31.21	30.34
TraesCS7A01G395400.1	Wheat	cytosol	29.43	28.72
TraesCS6A01G176200.1	Wheat	nucleus	30.5	27.83
TraesCS6A01G277700.1	Wheat	plastid	30.85	26.61
TraesCS1A01G043100.1	Wheat	mitochondrion, nucleus	30.5	26.54
TraesCS2A01G449300.1	Wheat	cytosol, nucleus, peroxisome	29.08	26.03
TraesCS7A01G225700.1	Wheat	nucleus	29.79	26.01
TraesCS5A01G245800.1	Wheat	cytosol, endoplasmic reticulum, nucleus	31.21	25.88
TraesCS7A01G076500.1	Wheat	cytosol, endoplasmic reticulum, nucleus	29.79	24.28
TraesCS4A01G374700.1	Wheat	nucleus	30.14	24.15

Protein Annotations

EnsemblPlants:TraesCS3A01G490800.1	EnsemblPlantsGene:TraesCS3A01G490800	Gene3D:3.30.1330.80	InterPro:IPR005175	InterPro:PPC_dom	PANTHER:PTHR31100
PANTHER:PTHR31100:SF9	PFAM:PF03479	PFscan:PS51742	SEG:seg	SUPFAM:SSF117856	TIGR:cd11378
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chr3A:+:718087025..718087918

Molecular Weight (calculated)

28175.4 Da

IEP (calculated)

7.369

GRAVY (calculated)

-0.022

Length

282 amino acids

Sequence
(BLAST)

001: MAGNEGLIEP APAPELALLP QPQAPAQGAT PASARTKPRG RPPGSRNKPK PPVVVVRESA GAMWPVVLEL AAGCDVAGAV AAFARRRGVG VSVLCGRGAL
101: AAVTLRLSTS AGTSRAVRLD GRFDVLSLSG TVLPAAGEGA GAAPTPFSVS LAGGDGQVVG GTLAGEMTAA DGGVVLVAAT FVTAEVHRLP AVEAEAAVEG
201: DDGRGGRQQQ QHQQQAMVAA SAADVGHVAA YGGVPGWGPG GHPGQVGHYA QHAEQMLSPW GVFPDSRAAP NHPASSSHHH YL

Best Arabidopsis Sequence Match ( AT5G49700.1 )
(BLAST)

001: MKGEYREQKS NEMFSKLPHH QQQQQQQQQQ HSLTSHFHLS STVTPTVDDS SIEVVRRPRG RPPGSKNKPK PPVFVTRDTD PPMSPYILEV PSGNDVVEAI
101: NRFCRRKSIG VCVLSGSGSV ANVTLRQPSP AALGSTITFH GKFDLLSVSA TFLPPPPRTS LSPPVSNFFT VSLAGPQGQI IGGFVAGPLI SAGTVYVIAA
201: SFNNPSYHRL PAEEEQKHSA GTGEREGQSP PVSGGGEESG QMAGSGGESC GVSMYSCHMG GSDVIWAPTA RAPPPY

Arabidopsis Description

AHL17AT-hook motif nuclear-localized protein 17 [Source:UniProtKB/Swiss-Prot;Acc:Q9LTA2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.