Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G490800.1 | Wheat | cytosol | 89.6 | 94.68 |
| TraesCS3D01G496700.1 | Wheat | cytosol | 92.62 | 92.0 |
| HORVU3Hr1G108820.1 | Barley | mitochondrion | 58.05 | 67.58 |
| OQU88209 | Sorghum | peroxisome | 54.03 | 64.4 |
| Os01t0953801-00 | Rice | nucleus | 54.03 | 60.75 |
| Zm00001d042060_P001 | Maize | plastid | 48.66 | 59.18 |
| TraesCS4B01G209800.1 | Wheat | cytosol, nucleus, plastid | 30.87 | 35.94 |
| TraesCS3B01G198900.1 | Wheat | plastid | 24.5 | 34.76 |
| TraesCS4B01G001100.1 | Wheat | cytosol, nucleus, peroxisome | 28.86 | 34.4 |
| TraesCS6B01G072300.1 | Wheat | nucleus | 29.53 | 31.21 |
| TraesCS7B01G187300.1 | Wheat | cytosol, nucleus, peroxisome | 29.19 | 30.63 |
| TraesCS6B01G439500.1 | Wheat | cytosol, extracellular, peroxisome | 28.19 | 28.67 |
| TraesCS6B01G209300.1 | Wheat | nucleus | 28.52 | 27.51 |
| TraesCS6B01G306100.1 | Wheat | plastid | 30.2 | 27.36 |
| TraesCS7B01G297300.1 | Wheat | cytosol | 26.51 | 27.05 |
| TraesCS5B01G243200.1 | Wheat | cytosol, endoplasmic reticulum, nucleus | 29.87 | 26.49 |
| TraesCS1B01G056000.1 | Wheat | mitochondrion | 28.52 | 26.15 |
| TraesCS7B01G193900.1 | Wheat | cytosol, nucleus, peroxisome | 27.85 | 25.78 |
| TraesCS2B01G470600.1 | Wheat | cytosol, nucleus, peroxisome | 26.85 | 25.56 |
Protein Annotations
| EnsemblPlants:TraesCS3B01G551700.1 | EnsemblPlantsGene:TraesCS3B01G551700 | Gene3D:3.30.1330.80 | InterPro:IPR005175 | InterPro:PPC_dom | PANTHER:PTHR31100 |
| PANTHER:PTHR31100:SF9 | PFAM:PF03479 | PFscan:PS51742 | SEG:seg | SUPFAM:SSF117856 | TIGR:cd11378 |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr3B:+:786600871..786601940
Molecular Weight (calculated)
29978.6 Da
IEP (calculated)
7.370
GRAVY (calculated)
-0.071
Length
298 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGNEGTPLA QLIEPAPAPE LALLPQTQGA TPASARTKAR GRPPGSRNKP KPPVVVVRES AGAMRPVVLE LAAGCDVAGT VAAFARRRGV GVSVLCGRGA
101: LAAVTLRLST SAGTSRAVRL EGRFDVLSLS GTVLPAAGEG AGAAPTPFSV SLAGGDGQVV GGTLAGEMTA ADGGVVLVAA TFVTAEVHRL PAVEAEAVVV
201: EGDDGRGGRQ EEEKRPPTSP PPPPQQHQQQ GMVAASAAEV GHVAAYGGVL LGWGPGGHPG QVGHYAQHAE QMLSPWGVFP DSRAAPNHPA SSSHHHYL
101: LAAVTLRLST SAGTSRAVRL EGRFDVLSLS GTVLPAAGEG AGAAPTPFSV SLAGGDGQVV GGTLAGEMTA ADGGVVLVAA TFVTAEVHRL PAVEAEAVVV
201: EGDDGRGGRQ EEEKRPPTSP PPPPQQHQQQ GMVAASAAEV GHVAAYGGVL LGWGPGGHPG QVGHYAQHAE QMLSPWGVFP DSRAAPNHPA SSSHHHYL
001: MKGEYREQKS NEMFSKLPHH QQQQQQQQQQ HSLTSHFHLS STVTPTVDDS SIEVVRRPRG RPPGSKNKPK PPVFVTRDTD PPMSPYILEV PSGNDVVEAI
101: NRFCRRKSIG VCVLSGSGSV ANVTLRQPSP AALGSTITFH GKFDLLSVSA TFLPPPPRTS LSPPVSNFFT VSLAGPQGQI IGGFVAGPLI SAGTVYVIAA
201: SFNNPSYHRL PAEEEQKHSA GTGEREGQSP PVSGGGEESG QMAGSGGESC GVSMYSCHMG GSDVIWAPTA RAPPPY
101: NRFCRRKSIG VCVLSGSGSV ANVTLRQPSP AALGSTITFH GKFDLLSVSA TFLPPPPRTS LSPPVSNFFT VSLAGPQGQI IGGFVAGPLI SAGTVYVIAA
201: SFNNPSYHRL PAEEEQKHSA GTGEREGQSP PVSGGGEESG QMAGSGGESC GVSMYSCHMG GSDVIWAPTA RAPPPY
Arabidopsis Description
AHL17AT-hook motif nuclear-localized protein 17 [Source:UniProtKB/Swiss-Prot;Acc:Q9LTA2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.