Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G490800.1 | Wheat | cytosol | 88.33 | 93.97 |
| TraesCS3B01G551700.1 | Wheat | cytosol | 92.0 | 92.62 |
| HORVU3Hr1G108820.1 | Barley | mitochondrion | 56.0 | 65.62 |
| OQU88209 | Sorghum | peroxisome | 53.67 | 64.4 |
| Os01t0953801-00 | Rice | nucleus | 55.0 | 62.26 |
| Zm00001d042060_P001 | Maize | plastid | 48.33 | 59.18 |
| TraesCS4D01G210500.1 | Wheat | cytosol, nucleus, plastid | 30.33 | 35.55 |
| TraesCS3D01G173400.1 | Wheat | plastid | 25.0 | 35.21 |
| TraesCS6D01G055500.1 | Wheat | cytosol | 30.0 | 31.91 |
| TraesCS7D01G294700.1 | Wheat | cytosol, nucleus, peroxisome | 29.0 | 30.63 |
| TraesCS4D01G001800.1 | Wheat | nucleus | 29.0 | 30.53 |
| TraesCS6D01G383400.1 | Wheat | cytosol, extracellular, peroxisome | 28.0 | 28.97 |
| TraesCS7D01G228800.1 | Wheat | nucleus | 29.0 | 27.36 |
| TraesCS6D01G167600.1 | Wheat | nucleus | 28.0 | 27.18 |
| TraesCS6D01G258400.1 | Wheat | plastid | 29.67 | 27.05 |
| TraesCS1D01G043600.1 | Wheat | mitochondrion | 28.67 | 26.54 |
| TraesCS2D01G448700.1 | Wheat | cytosol, nucleus, peroxisome | 27.33 | 26.2 |
| TraesCS5D01G252500.1 | Wheat | cytosol | 28.67 | 25.67 |
| TraesCS7D01G072200.1 | Wheat | cytosol, endoplasmic reticulum, nucleus | 27.67 | 23.92 |
| TraesCS5D01G199600.1 | Wheat | plastid | 22.33 | 12.86 |
Protein Annotations
| EnsemblPlants:TraesCS3D01G496700.1 | EnsemblPlantsGene:TraesCS3D01G496700 | Gene3D:3.30.1330.80 | InterPro:IPR005175 | InterPro:PPC_dom | PANTHER:PTHR31100 |
| PANTHER:PTHR31100:SF9 | PFAM:PF03479 | PFscan:PS51742 | SEG:seg | SUPFAM:SSF117856 | TIGR:cd11378 |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr3D:+:588198795..588199897
Molecular Weight (calculated)
30202.8 Da
IEP (calculated)
7.843
GRAVY (calculated)
-0.121
Length
300 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGNEGTSLA QLIEPTPAPE LALLPQPQAS AQGATPASAR AKPRGRPPGS RNKPKPPVVV VRESAGAMRP VVLELAAGCD VAGAVAAFAR RRGVGVSVLC
101: GRGALAAVTL RLSTSAGTSR AVRLDGRFDV LSLSGTVLPA GAGAATTPFS VSLAGADGQV VGGTLAGEMT AADGGVLLVA ATFVTAEVHR LPAVEAEPVV
201: EGDGGRGGRQ EEEKRPPTSP PPPPQQQQQH EQHAMVAASA ADVGHVAAHG GVLGWGPGGH PGQVGHYAQH AEQMLSPWGV FPDSRAAPNH PASSSHHHYL
101: GRGALAAVTL RLSTSAGTSR AVRLDGRFDV LSLSGTVLPA GAGAATTPFS VSLAGADGQV VGGTLAGEMT AADGGVLLVA ATFVTAEVHR LPAVEAEPVV
201: EGDGGRGGRQ EEEKRPPTSP PPPPQQQQQH EQHAMVAASA ADVGHVAAHG GVLGWGPGGH PGQVGHYAQH AEQMLSPWGV FPDSRAAPNH PASSSHHHYL
001: MKGEYREQKS NEMFSKLPHH QQQQQQQQQQ HSLTSHFHLS STVTPTVDDS SIEVVRRPRG RPPGSKNKPK PPVFVTRDTD PPMSPYILEV PSGNDVVEAI
101: NRFCRRKSIG VCVLSGSGSV ANVTLRQPSP AALGSTITFH GKFDLLSVSA TFLPPPPRTS LSPPVSNFFT VSLAGPQGQI IGGFVAGPLI SAGTVYVIAA
201: SFNNPSYHRL PAEEEQKHSA GTGEREGQSP PVSGGGEESG QMAGSGGESC GVSMYSCHMG GSDVIWAPTA RAPPPY
101: NRFCRRKSIG VCVLSGSGSV ANVTLRQPSP AALGSTITFH GKFDLLSVSA TFLPPPPRTS LSPPVSNFFT VSLAGPQGQI IGGFVAGPLI SAGTVYVIAA
201: SFNNPSYHRL PAEEEQKHSA GTGEREGQSP PVSGGGEESG QMAGSGGESC GVSMYSCHMG GSDVIWAPTA RAPPPY
Arabidopsis Description
AHL17AT-hook motif nuclear-localized protein 17 [Source:UniProtKB/Swiss-Prot;Acc:Q9LTA2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.