Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G551700.1 | Wheat | cytosol | 67.58 | 58.05 |
| TraesCS3A01G490800.1 | Wheat | cytosol | 63.28 | 57.45 |
| TraesCS3D01G496700.1 | Wheat | cytosol | 65.62 | 56.0 |
| OQU88209 | Sorghum | peroxisome | 43.36 | 44.4 |
| Os01t0953801-00 | Rice | nucleus | 44.92 | 43.4 |
| Zm00001d042060_P001 | Maize | plastid | 41.02 | 42.86 |
| HORVU7Hr1G020390.1 | Barley | mitochondrion | 21.88 | 29.63 |
| HORVU4Hr1G060280.1 | Barley | cytosol, nucleus, plastid | 27.73 | 27.73 |
| HORVU3Hr1G033710.2 | Barley | plastid | 21.88 | 26.29 |
| HORVU6Hr1G010470.2 | Barley | cytosol, nucleus, peroxisome | 27.34 | 24.91 |
| HORVU4Hr1G000870.2 | Barley | nucleus | 27.73 | 24.74 |
| HORVU6Hr1G037630.1 | Barley | nucleus | 29.69 | 24.6 |
| HORVU6Hr1G037640.1 | Barley | nucleus | 29.69 | 24.6 |
| HORVU7Hr1G070490.2 | Barley | cytosol, mitochondrion, peroxisome | 26.56 | 23.61 |
| HORVU7Hr1G046930.1 | Barley | cytosol, nucleus, peroxisome | 28.52 | 23.1 |
| HORVU4Hr1G015750.1 | Barley | mitochondrion | 25.0 | 23.02 |
| HORVU6Hr1G091740.1 | Barley | cytosol | 26.17 | 22.95 |
| HORVU1Hr1G008650.1 | Barley | mitochondrion, nucleus, peroxisome | 28.52 | 22.67 |
| HORVU6Hr1G070090.1 | Barley | plastid | 28.91 | 22.36 |
| HORVU7Hr1G093230.2 | Barley | cytosol | 25.0 | 21.12 |
| HORVU7Hr1G017700.2 | Barley | nucleus | 26.56 | 19.48 |
| HORVU0Hr1G011700.1 | Barley | cytosol | 14.45 | 17.13 |
Protein Annotations
| EnsemblPlants:HORVU3Hr1G108820.1 | EnsemblPlantsGene:HORVU3Hr1G108820 | Gene3D:3.30.1330.80 | InterPro:IPR005175 | InterPro:PPC_dom | PANTHER:PTHR31100 |
| PANTHER:PTHR31100:SF9 | PFAM:PF03479 | PFscan:PS51742 | SEG:seg | SUPFAM:SSF117856 | UniParc:UPI000B46AA2D |
| UniProt:A0A287MMG4 | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chrchr3H:+:676443051..676443819
Molecular Weight (calculated)
25314.5 Da
IEP (calculated)
6.806
GRAVY (calculated)
-0.229
Length
256 amino acids
Sequence
(BLAST)
(BLAST)
001: GPADRARARA RSAAAHAGAG AGAESRERAE EAAGPAAGIE EQAEAAGGAG AGERGGDAAG RAGAGRRLRR GRRGAAFARR RGVGVSVLCG RGALAAVTLR
101: LSTSPETSRA VRLEGRFDVL SLSGTVLPAA VEGAGTPPAP FSVSLAGGDG QVVGGTVAGE MTAADGGVVL VAATFVSAEV HRLPEAEAEA VVEEADGRQE
201: QERRPATPPP PPPQAQQMVA TSAADLGHIA AYGGVLGWAP GGHPGQVGHY AQHAEQ
101: LSTSPETSRA VRLEGRFDVL SLSGTVLPAA VEGAGTPPAP FSVSLAGGDG QVVGGTVAGE MTAADGGVVL VAATFVSAEV HRLPEAEAEA VVEEADGRQE
201: QERRPATPPP PPPQAQQMVA TSAADLGHIA AYGGVLGWAP GGHPGQVGHY AQHAEQ
001: MKGEYREQKS NEMFSKLPHH QQQQQQQQQQ HSLTSHFHLS STVTPTVDDS SIEVVRRPRG RPPGSKNKPK PPVFVTRDTD PPMSPYILEV PSGNDVVEAI
101: NRFCRRKSIG VCVLSGSGSV ANVTLRQPSP AALGSTITFH GKFDLLSVSA TFLPPPPRTS LSPPVSNFFT VSLAGPQGQI IGGFVAGPLI SAGTVYVIAA
201: SFNNPSYHRL PAEEEQKHSA GTGEREGQSP PVSGGGEESG QMAGSGGESC GVSMYSCHMG GSDVIWAPTA RAPPPY
101: NRFCRRKSIG VCVLSGSGSV ANVTLRQPSP AALGSTITFH GKFDLLSVSA TFLPPPPRTS LSPPVSNFFT VSLAGPQGQI IGGFVAGPLI SAGTVYVIAA
201: SFNNPSYHRL PAEEEQKHSA GTGEREGQSP PVSGGGEESG QMAGSGGESC GVSMYSCHMG GSDVIWAPTA RAPPPY
Arabidopsis Description
AHL17AT-hook motif nuclear-localized protein 17 [Source:UniProtKB/Swiss-Prot;Acc:Q9LTA2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.