Factsheet for HORVU1Hr1G008650.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome, nucleus

Predictor Summary:

mitochondrion 1
nucleus 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, nucleus, peroxisome
Any Predictor:	mitochondrion, nucleus
MultiLoc:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G043600.1	Wheat	mitochondrion	97.2	96.6
TraesCS1B01G056000.1	Wheat	mitochondrion	96.89	96.0
TraesCS1A01G043100.1	Wheat	mitochondrion, nucleus	96.27	95.68
HORVU7Hr1G020390.1	Barley	mitochondrion	51.86	88.36
HORVU4Hr1G015750.1	Barley	mitochondrion	72.36	83.81
HORVU4Hr1G060280.1	Barley	cytosol, nucleus, plastid	48.45	60.94
HORVU6Hr1G010470.2	Barley	cytosol, nucleus, peroxisome	45.96	52.67
HORVU4Hr1G000870.2	Barley	nucleus	45.65	51.22
HORVU6Hr1G091740.1	Barley	cytosol	44.1	48.63
HORVU7Hr1G070490.2	Barley	cytosol, mitochondrion, peroxisome	41.61	46.53
HORVU6Hr1G037630.1	Barley	nucleus	42.86	44.66
HORVU6Hr1G037640.1	Barley	nucleus	42.86	44.66
HORVU6Hr1G070090.1	Barley	plastid	44.41	43.2
HORVU7Hr1G046930.1	Barley	cytosol, nucleus, peroxisome	40.37	41.14
HORVU7Hr1G017700.2	Barley	nucleus	40.37	37.25
HORVU3Hr1G033710.2	Barley	plastid	24.53	37.09
HORVU0Hr1G011700.1	Barley	cytosol	23.29	34.72
HORVU7Hr1G093230.2	Barley	cytosol	32.61	34.65
HORVU3Hr1G108820.1	Barley	mitochondrion	22.67	28.52

Protein Annotations

Gene3D:3.30.1330.80	MapMan:35.1	EMBL:AK363089	InterPro:AT-hook_nuclear	UniProt:F2DGS2	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003680	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:HORVU1Hr1G008650	EnsemblPlants:HORVU1Hr1G008650.1
InterPro:IPR005175	PFAM:PF03479	PIRSF:PIRSF016021	InterPro:PPC_dom	PFscan:PS51742	PANTHER:PTHR31100
PANTHER:PTHR31100:SF13	SUPFAM:SSF117856	UniParc:UPI000200682B	SEG:seg	:	:

Description

AT-hook motif nuclear-localized protein [Source:UniProtKB/TrEMBL;Acc:F2DGS2]

Coordinates

chrchr1H:-:18846019..18848329

Molecular Weight (calculated)

31653.2 Da

IEP (calculated)

6.355

GRAVY (calculated)

-0.169

Length

322 amino acids

Sequence
(BLAST)

001: MAWWAGSMGG LDLRNHLAQF GGPAAGGAMG GAEQAPTTPN SSGSNNHDES SGAAQDSPTA GAGDNSPNPN AAISGSGPSG GGSGGGGGSS SGRRPRGRPA
101: GSKNKPKPPI IITRESPNTL RSHVLEIASG ADIMEAVATF ARRRQRGVSV LSGSGVVGNV TLRQPAAPPG SVVTLHGRFE ILSLSGAFLP SPCPPGATGL
201: AVYLAGGQGQ VVGGTVIGEL VASGPVMVVA ATFSNATYER LPLAEEEPGE AAVAATGSDG MQLPDVPAPG GNGGMGAAVG VPGLTDPSSM PFYNLPPNLM
301: PNGGGQMPHD VFGSFRPPPP AF

Best Arabidopsis Sequence Match ( AT1G76500.1 )
(BLAST)

001: MDGGYDQSGG ASRYFHNLFR PELHHQLQPQ PQLHPLPQPQ PQPQPQQQNS DDESDSNKDP GSDPVTSGST GKRPRGRPPG SKNKPKPPVI VTRDSPNVLR
101: SHVLEVSSGA DIVESVTTYA RRRGRGVSIL SGNGTVANVS LRQPATTAAH GANGGTGGVV ALHGRFEILS LTGTVLPPPA PPGSGGLSIF LSGVQGQVIG
201: GNVVAPLVAS GPVILMAASF SNATFERLPL EDEGGEGGEG GEVGEGGGGE GGPPPATSSS PPSGAGQGQL RGNMSGYDQF AGDPHLLGWG AAAAAAPPRP
301: AF

Arabidopsis Description

AHL29AT-hook motif nuclear-localized protein 29 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9K7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.