Factsheet for HORVU4Hr1G015750.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
TargetP:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU7Hr1G020390.1	Barley	mitochondrion	55.04	80.95
HORVU1Hr1G008650.1	Barley	mitochondrion, nucleus, peroxisome	83.81	72.36
TraesCS1D01G043600.1	Wheat	mitochondrion	83.45	71.6
TraesCS1B01G056000.1	Wheat	mitochondrion	83.09	71.08
TraesCS1A01G043100.1	Wheat	mitochondrion, nucleus	82.73	70.99
HORVU4Hr1G060280.1	Barley	cytosol, nucleus, plastid	49.64	53.91
HORVU6Hr1G010470.2	Barley	cytosol, nucleus, peroxisome	44.96	44.48
HORVU4Hr1G000870.2	Barley	nucleus	44.6	43.21
HORVU6Hr1G091740.1	Barley	cytosol	44.24	42.12
HORVU7Hr1G070490.2	Barley	cytosol, mitochondrion, peroxisome	42.45	40.97
HORVU6Hr1G037630.1	Barley	nucleus	43.88	39.48
HORVU6Hr1G037640.1	Barley	nucleus	43.88	39.48
HORVU6Hr1G070090.1	Barley	plastid	44.96	37.76
HORVU7Hr1G046930.1	Barley	cytosol, nucleus, peroxisome	40.29	35.44
HORVU7Hr1G017700.2	Barley	nucleus	43.53	34.67
HORVU3Hr1G033710.2	Barley	plastid	25.18	32.86
HORVU7Hr1G093230.2	Barley	cytosol	35.25	32.34
HORVU0Hr1G011700.1	Barley	cytosol	22.3	28.7
HORVU3Hr1G108820.1	Barley	mitochondrion	23.02	25.0

Protein Annotations

Gene3D:3.30.1330.80	MapMan:35.1	UniProt:A0A287NCM0	InterPro:AT-hook_nuclear	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003680	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:HORVU4Hr1G015750	EnsemblPlants:HORVU4Hr1G015750.1	InterPro:IPR005175
PFAM:PF03479	PIRSF:PIRSF016021	InterPro:PPC_dom	PFscan:PS51742	PANTHER:PTHR31100	PANTHER:PTHR31100:SF13
SUPFAM:SSF117856	UniParc:UPI000B464D87	SEG:seg	:	:	:

Description

AT-hook motif nuclear-localized protein [Source:UniProtKB/TrEMBL;Acc:A0A287NCM0]

Coordinates

chrchr4H:-:62884128..62885155

Molecular Weight (calculated)

28149.4 Da

IEP (calculated)

8.729

GRAVY (calculated)

-0.113

Length

278 amino acids

Sequence
(BLAST)

001: STVQIRYPRR WGWAAARSPT GRAWRGVFTS GSGPSGGGSG GGGGSSSGRR PRGRPAGSKN KPKPPVIITR ESPNTLRSHV LEIASGADIM EAVATFVQRR
101: QRGVSVLSGS GVVGNVTLRQ PAAPPDSVIT LHSHFGILSL SGAFLPLPCP SEATGLAVYL ADGLGQVVGG TVIGELVASG PVMVVATTFS NATYECLPLA
201: DEESGEAATT ATGSDGTQLP DGLAPGGNGG MGATVGVPGL PDPSSMPFYN LPPNLMPNGD GQMPHDVFGS FRPPPPAF

Best Arabidopsis Sequence Match ( AT1G76500.1 )
(BLAST)

001: MDGGYDQSGG ASRYFHNLFR PELHHQLQPQ PQLHPLPQPQ PQPQPQQQNS DDESDSNKDP GSDPVTSGST GKRPRGRPPG SKNKPKPPVI VTRDSPNVLR
101: SHVLEVSSGA DIVESVTTYA RRRGRGVSIL SGNGTVANVS LRQPATTAAH GANGGTGGVV ALHGRFEILS LTGTVLPPPA PPGSGGLSIF LSGVQGQVIG
201: GNVVAPLVAS GPVILMAASF SNATFERLPL EDEGGEGGEG GEVGEGGGGE GGPPPATSSS PPSGAGQGQL RGNMSGYDQF AGDPHLLGWG AAAAAAPPRP
301: AF

Arabidopsis Description

AHL29AT-hook motif nuclear-localized protein 29 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9K7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.