Factsheet for HORVU3Hr1G033710.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G167300.1	Wheat	plastid	96.71	96.71
TraesCS3D01G173400.1	Wheat	plastid	95.31	95.31
TraesCS3B01G198900.1	Wheat	plastid	93.9	95.24
Zm00001d039249_P001	Maize	cytosol	55.4	76.13
EER99980	Sorghum	plastid	67.14	67.77
Os01t0246601-00	Rice	plastid	71.83	67.11
Zm00001d009031_P001	Maize	mitochondrion, plastid	61.97	65.02
HORVU4Hr1G060280.1	Barley	cytosol, nucleus, plastid	38.5	32.03
HORVU7Hr1G070490.2	Barley	cytosol, mitochondrion, peroxisome	41.31	30.56
HORVU6Hr1G010470.2	Barley	cytosol, nucleus, peroxisome	39.44	29.89
HORVU7Hr1G020390.1	Barley	mitochondrion	26.29	29.63
HORVU4Hr1G000870.2	Barley	nucleus	38.5	28.57
HORVU6Hr1G091740.1	Barley	cytosol	38.03	27.74
HORVU6Hr1G037640.1	Barley	nucleus	39.44	27.18
HORVU6Hr1G037630.1	Barley	nucleus	39.44	27.18
HORVU7Hr1G046930.1	Barley	cytosol, nucleus, peroxisome	37.56	25.32
HORVU4Hr1G015750.1	Barley	mitochondrion	32.86	25.18
HORVU7Hr1G017700.2	Barley	nucleus	40.38	24.64
HORVU1Hr1G008650.1	Barley	mitochondrion, nucleus, peroxisome	37.09	24.53
HORVU6Hr1G070090.1	Barley	plastid	38.03	24.47
HORVU7Hr1G093230.2	Barley	cytosol	33.8	23.76
HORVU3Hr1G108820.1	Barley	mitochondrion	26.29	21.88
HORVU0Hr1G011700.1	Barley	cytosol	21.6	21.3

Protein Annotations

Gene3D:3.30.1330.80	MapMan:35.2	UniProt:A0A287KPY5	InterPro:AT-hook_nuclear	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003680	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	EnsemblPlantsGene:HORVU3Hr1G033710
EnsemblPlants:HORVU3Hr1G033710.2	InterPro:IPR005175	PFAM:PF03479	PIRSF:PIRSF016021	InterPro:PPC_dom	PFscan:PS51742
PANTHER:PTHR31100	PANTHER:PTHR31100:SF11	SUPFAM:SSF117856	TMHMM:TMhelix	UniParc:UPI000B47FBD9	SEG:seg

Description

AT-hook motif nuclear-localized protein [Source:UniProtKB/TrEMBL;Acc:A0A287KPY5]

Coordinates

chrchr3H:+:178068801..178069442

Molecular Weight (calculated)

21412.2 Da

IEP (calculated)

10.039

GRAVY (calculated)

0.327

Length

213 amino acids

Sequence
(BLAST)

001: MGMATAAAAT TAAPDKLRQP CRPRPAAPIS SSKNRVPKAP VVIAHECPSA MRAHVLEVPA GRDVLSSVAA FARRGRCGAL VLGAAGHVAD VVLREPALVL
101: RGTTEILSLA GCFFPSPAAS AAGVAVFLAG PRGSVLGGAV AEGGLVAAGP VVVMVATFVA AAIDRLPLVK GDESSKADGS DVHGVAEQWR CGGKPVQQQC
201: GWAPLCRKLG AKS

Best Arabidopsis Sequence Match ( AT2G42940.1 )
(BLAST)

001: MAGGTALTPT SVGSKSVPMR NHEATERGNT NNNLRALPKA VQPVSSIEGE MAKRPRGRPA GSKNKPKPPI IVTHDSPNSL RANAVEISSG CDICETLSDF
101: ARRKQRGLCI LSANGCVTNV TLRQPASSGA IVTLHGRYEI LSLLGSILPP PAPLGITGLT IYLAGPQGQV VGGGVVGGLI ASGPVVLMAA SFMNAVFDRL
201: PMDDDEAASM QNQQYYQNGR SRPLDDIHGL PQNLLTNGNS ASDIYSWGPA QRVMSKP

Arabidopsis Description

AHL16AT-hook motif nuclear-localized protein [Source:UniProtKB/TrEMBL;Acc:A0A178VQG3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.