Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 8
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS3A01G167300.1 | Wheat | plastid | 97.62 | 96.24 |
TraesCS3D01G173400.1 | Wheat | plastid | 96.19 | 94.84 |
HORVU3Hr1G033710.2 | Barley | plastid | 95.24 | 93.9 |
Zm00001d039249_P001 | Maize | cytosol | 56.67 | 76.77 |
EER99980 | Sorghum | plastid | 68.1 | 67.77 |
Os01t0246601-00 | Rice | plastid | 73.33 | 67.54 |
Zm00001d009031_P001 | Maize | mitochondrion, plastid | 62.38 | 64.53 |
TraesCS4B01G001100.1 | Wheat | cytosol, nucleus, peroxisome | 38.1 | 32.0 |
TraesCS4B01G209800.1 | Wheat | cytosol, nucleus, plastid | 38.57 | 31.64 |
TraesCS7B01G187300.1 | Wheat | cytosol, nucleus, peroxisome | 41.43 | 30.63 |
TraesCS6B01G072300.1 | Wheat | nucleus | 39.05 | 29.08 |
TraesCS2B01G470600.1 | Wheat | cytosol, nucleus, peroxisome | 40.48 | 27.16 |
TraesCS6B01G439500.1 | Wheat | cytosol, extracellular, peroxisome | 37.62 | 26.96 |
TraesCS6B01G209300.1 | Wheat | nucleus | 39.52 | 26.86 |
TraesCS7B01G297300.1 | Wheat | cytosol | 36.19 | 26.03 |
TraesCS6B01G306100.1 | Wheat | plastid | 39.05 | 24.92 |
TraesCS7B01G193900.1 | Wheat | cytosol, nucleus, peroxisome | 37.62 | 24.53 |
TraesCS3B01G551700.1 | Wheat | cytosol | 34.76 | 24.5 |
TraesCS1B01G056000.1 | Wheat | mitochondrion | 37.14 | 24.0 |
TraesCS5B01G243200.1 | Wheat | cytosol, endoplasmic reticulum, nucleus | 36.19 | 22.62 |
Protein Annotations
EnsemblPlants:TraesCS3B01G198900.1 | EnsemblPlantsGene:TraesCS3B01G198900 | Gene3D:3.30.1330.80 | InterPro:AT-hook_nuclear | InterPro:IPR005175 | InterPro:PPC_dom |
PANTHER:PTHR31100 | PANTHER:PTHR31100:SF11 | PFAM:PF03479 | PFscan:PS51742 | PIRSF:PIRSF016021 | SEG:seg |
SUPFAM:SSF117856 | TIGR:cd11378 | TMHMM:TMhelix | MapMan:35.2 | : | : |
Description
No Description!
Coordinates
chr3B:-:226483741..226484373
Molecular Weight (calculated)
21258.0 Da
IEP (calculated)
10.093
GRAVY (calculated)
0.312
Length
210 amino acids
Sequence
(BLAST)
(BLAST)
001: MGMATATTAA PDKLRQPCRP RPAAQIPSSK NRVPKAPVVI AHECPSAMRA HVLEVPAGRD VLSCVAAFAR RGRCGALVLG AAGHVADVVL REPALVLRGT
101: TEILSLAGCF FPSPSASAAG VAVFLAGPRG SVLGGAVADG GLVAAGPVVV MVATFVAAAI DRLPLVKGDE SSKAEGSDVH GVAGQWRFGG QPLQQQCGWA
201: PLCRKLGAKS
101: TEILSLAGCF FPSPSASAAG VAVFLAGPRG SVLGGAVADG GLVAAGPVVV MVATFVAAAI DRLPLVKGDE SSKAEGSDVH GVAGQWRFGG QPLQQQCGWA
201: PLCRKLGAKS
001: MAGGTALTPT SVGSKSVPMR NHEATERGNT NNNLRALPKA VQPVSSIEGE MAKRPRGRPA GSKNKPKPPI IVTHDSPNSL RANAVEISSG CDICETLSDF
101: ARRKQRGLCI LSANGCVTNV TLRQPASSGA IVTLHGRYEI LSLLGSILPP PAPLGITGLT IYLAGPQGQV VGGGVVGGLI ASGPVVLMAA SFMNAVFDRL
201: PMDDDEAASM QNQQYYQNGR SRPLDDIHGL PQNLLTNGNS ASDIYSWGPA QRVMSKP
101: ARRKQRGLCI LSANGCVTNV TLRQPASSGA IVTLHGRYEI LSLLGSILPP PAPLGITGLT IYLAGPQGQV VGGGVVGGLI ASGPVVLMAA SFMNAVFDRL
201: PMDDDEAASM QNQQYYQNGR SRPLDDIHGL PQNLLTNGNS ASDIYSWGPA QRVMSKP
Arabidopsis Description
AHL16AT-hook motif nuclear-localized protein [Source:UniProtKB/TrEMBL;Acc:A0A178VQG3]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.