Factsheet for TraesCS2B01G470600.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

mitochondrion 2
cytosol 1
nucleus 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, peroxisome
Any Predictor:	cytosol, mitochondrion, nucleus, peroxisome
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G448700.1	Wheat	cytosol, nucleus, peroxisome	99.04	99.04
TraesCS2A01G449300.1	Wheat	cytosol, nucleus, peroxisome	99.36	98.73
Os04t0590200-01	Rice	cytosol	84.98	87.21
Zm00001d002495_P001	Maize	cytosol, nucleus, peroxisome	83.07	84.14
EES12751	Sorghum	cytosol, nucleus, peroxisome	83.71	83.97
Zm00001d026035_P001	Maize	cytosol, nucleus, peroxisome	82.75	83.55
KRH28289	Soybean	cytosol	55.59	69.6
KRH77205	Soybean	nucleus	55.59	69.6
KRH00993	Soybean	nucleus	58.79	68.66
KRH40225	Soybean	nucleus	58.15	67.41
Solyc01g080960.2.1	Tomato	nucleus	55.59	65.66
PGSC0003DMT400004515	Potato	nucleus	46.96	65.62
TraesCS7B01G187300.1	Wheat	cytosol, nucleus, peroxisome	55.91	61.62
VIT_15s0045g01130.t01	Wine grape	cytosol, plastid	44.41	56.5
TraesCS4B01G001100.1	Wheat	cytosol, nucleus, peroxisome	40.89	51.2
TraesCS6B01G209300.1	Wheat	nucleus	48.56	49.19
TraesCS4B01G209800.1	Wheat	cytosol, nucleus, plastid	38.98	47.66
TraesCS6B01G072300.1	Wheat	nucleus	42.17	46.81
TraesCS6B01G439500.1	Wheat	cytosol, extracellular, peroxisome	43.45	46.42
TraesCS6B01G306100.1	Wheat	plastid	45.05	42.86
TraesCS1B01G056000.1	Wheat	mitochondrion	43.77	42.15
TraesCS7B01G193900.1	Wheat	cytosol, nucleus, peroxisome	42.49	41.3
TraesCS3B01G198900.1	Wheat	plastid	27.16	40.48
TraesCS7B01G297300.1	Wheat	cytosol	34.82	37.33
TraesCS5B01G243200.1	Wheat	cytosol, endoplasmic reticulum, nucleus	31.95	29.76
TraesCS3B01G551700.1	Wheat	cytosol	25.56	26.85

Protein Annotations

EnsemblPlants:TraesCS2B01G470600.1	EnsemblPlantsGene:TraesCS2B01G470600	Gene3D:3.30.1330.80	InterPro:IPR005175	InterPro:PPC_dom	PANTHER:PTHR31100
PANTHER:PTHR31100:SF14	PFAM:PF03479	PFscan:PS51742	SEG:seg	SUPFAM:SSF117856	TIGR:cd11378
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chr2B:+:666935330..666936271

Molecular Weight (calculated)

31686.1 Da

IEP (calculated)

6.075

GRAVY (calculated)

-0.293

Length

313 amino acids

Sequence
(BLAST)

001: MAGLDLGTAA TRYVHQFHHL HPDLQLQQNS YAKQQHEPAD DDNNGNGNGG NYGAQYGENN DGGSSSSGPA GDGAGGGGGG GPGDMVARRP RGRPPGSKNK
101: PKPPVIITRE SANTLRAHIL EVGSGCDVFE CISTYACRRQ RGVCVLSGSG IVTNVTLRQP SAPAGAVVTL HGRFEILSLS GSFLPPPAPP GATSLTIFLA
201: GGQGQVVGGN VVGALYAAGP VIVIAASFAN VAYERLPLED EEAPPATAGM QMQQPGDAEA AAGMGGVPFP PDPSAAGLPF FNQLPLNNMT GGPGSQLPPG
301: ADGHGWAGGR PQF

Best Arabidopsis Sequence Match ( AT4G17800.1 )
(BLAST)

001: MAGLDLGTAF RYVNHQLHRP DLHLHHNSSS DDVTPGAGMG HFTVDDEDNN NNHQGLDLAS GGGSGSSGGG GGHGGGGDVV GRRPRGRPPG SKNKPKPPVI
101: ITRESANTLR AHILEVTNGC DVFDCVATYA RRRQRGICVL SGSGTVTNVS IRQPSAAGAV VTLQGTFEIL SLSGSFLPPP APPGATSLTI FLAGGQGQVV
201: GGSVVGELTA AGPVIVIAAS FTNVAYERLP LEEDEQQQQL GGGSNGGGNL FPEVAAGGGG GLPFFNLPMN MQPNVQLPVE GWPGNSGGRG PF

Arabidopsis Description

AHL23AT-hook motif nuclear-localized protein 23 [Source:UniProtKB/Swiss-Prot;Acc:O23620]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.