Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- cytosol 1
- nucleus 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES12751 | Sorghum | cytosol, nucleus, peroxisome | 97.41 | 96.47 |
| Zm00001d026035_P001 | Maize | cytosol, nucleus, peroxisome | 95.79 | 95.48 |
| Os04t0590200-01 | Rice | cytosol | 88.67 | 89.84 |
| TraesCS2B01G470600.1 | Wheat | cytosol, nucleus, peroxisome | 84.14 | 83.07 |
| TraesCS2D01G448700.1 | Wheat | cytosol, nucleus, peroxisome | 84.14 | 83.07 |
| TraesCS2A01G449300.1 | Wheat | cytosol, nucleus, peroxisome | 83.82 | 82.22 |
| KRH77205 | Soybean | nucleus | 57.61 | 71.2 |
| KRH28289 | Soybean | cytosol | 57.28 | 70.8 |
| KRH00993 | Soybean | nucleus | 59.87 | 69.03 |
| KRH40225 | Soybean | nucleus | 59.22 | 67.78 |
| Solyc01g080960.2.1 | Tomato | nucleus | 55.99 | 65.28 |
| PGSC0003DMT400004515 | Potato | nucleus | 46.28 | 63.84 |
| Zm00001d024537_P001 | Maize | cytosol, endoplasmic reticulum, nucleus | 59.87 | 63.57 |
| Zm00001d049521_P001 | Maize | cytosol, endoplasmic reticulum, peroxisome | 56.96 | 58.86 |
| VIT_15s0045g01130.t01 | Wine grape | cytosol, plastid | 45.31 | 56.91 |
| Zm00001d018508_P001 | Maize | cytosol | 41.75 | 52.65 |
| Zm00001d016132_P001 | Maize | nucleus | 51.13 | 51.13 |
| Zm00001d049906_P001 | Maize | nucleus | 43.37 | 50.57 |
| Zm00001d053429_P001 | Maize | nucleus | 52.1 | 50.31 |
| Zm00001d031887_P001 | Maize | nucleus | 42.39 | 48.7 |
| Zm00001d051620_P001 | Maize | plastid | 46.6 | 45.43 |
| Zm00001d017825_P001 | Maize | plastid | 47.57 | 45.37 |
| Zm00001d039249_P001 | Maize | cytosol | 22.65 | 45.16 |
| Zm00001d036088_P001 | Maize | extracellular | 40.13 | 44.29 |
| Zm00001d028577_P001 | Maize | nucleus | 38.51 | 43.59 |
| Zm00001d045928_P001 | Maize | nucleus | 42.72 | 43.14 |
| Zm00001d046696_P001 | Maize | cytosol, nucleus, peroxisome | 37.22 | 42.44 |
| Zm00001d045427_P001 | Maize | cytosol, nucleus, plasma membrane | 46.28 | 41.94 |
| Zm00001d009031_P001 | Maize | mitochondrion, plastid | 25.57 | 38.92 |
| Zm00001d042060_P001 | Maize | plastid | 28.48 | 35.92 |
| Zm00001d031826_P001 | Maize | cytosol, endoplasmic reticulum, nucleus | 29.77 | 31.29 |
| Zm00001d020768_P001 | Maize | cytosol | 31.39 | 29.13 |
| Zm00001d005923_P001 | Maize | nucleus | 31.39 | 28.2 |
Protein Annotations
| EnsemblPlants:Zm00001d002495_P001 | EnsemblPlants:Zm00001d002495_T001 | EnsemblPlantsGene:Zm00001d002495 | EntrezGene:103646009 | Gene3D:3.30.1330.80 | InterPro:IPR005175 |
| InterPro:PPC_dom | PANTHER:PTHR31100 | PANTHER:PTHR31100:SF14 | PFAM:PF03479 | PFscan:PS51742 | ProteinID:ONM14541.1 |
| SEG:seg | SUPFAM:SSF117856 | UniParc:UPI0004DEB9CC | UniProt:A0A1D6E1J2 | MapMan:35.1 | : |
Description
AT-hook motif nuclear-localized protein 21
Coordinates
chr2:+:14010848..14011777
Molecular Weight (calculated)
31020.5 Da
IEP (calculated)
6.602
GRAVY (calculated)
-0.261
Length
309 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGLDLGTAA TRYVHQLHHL HPDLQLQHNY AKQPEPSEDD PNGGGGGNSN NGGPYGEHDG GSSSSGPAGD APGGSGGNGE MVVRRPRGRP PGSKNKPKPP
101: VIITRESANT LRAHILEVAS GCDVFESVST YARRRQRGVC VLSGSGVVTN VTLRQPSAPA GAVVTLHGRF EILSLSGSFL PPPAPPGATS LTIFLAGGQG
201: QVVGGNVVGA LYAAGPVIVI AASFANVAYE RLPLEEEEAQ AAPPGLQMQP PGGGVDGAGG MGGGPFPPDP SAAAGLPFFN LPLNNMSGGG SPLPPGADGH
301: GWAGARPPF
101: VIITRESANT LRAHILEVAS GCDVFESVST YARRRQRGVC VLSGSGVVTN VTLRQPSAPA GAVVTLHGRF EILSLSGSFL PPPAPPGATS LTIFLAGGQG
201: QVVGGNVVGA LYAAGPVIVI AASFANVAYE RLPLEEEEAQ AAPPGLQMQP PGGGVDGAGG MGGGPFPPDP SAAAGLPFFN LPLNNMSGGG SPLPPGADGH
301: GWAGARPPF
001: MAGLDLGTAF RYVNHQLHRP DLHLHHNSSS DDVTPGAGMG HFTVDDEDNN NNHQGLDLAS GGGSGSSGGG GGHGGGGDVV GRRPRGRPPG SKNKPKPPVI
101: ITRESANTLR AHILEVTNGC DVFDCVATYA RRRQRGICVL SGSGTVTNVS IRQPSAAGAV VTLQGTFEIL SLSGSFLPPP APPGATSLTI FLAGGQGQVV
201: GGSVVGELTA AGPVIVIAAS FTNVAYERLP LEEDEQQQQL GGGSNGGGNL FPEVAAGGGG GLPFFNLPMN MQPNVQLPVE GWPGNSGGRG PF
101: ITRESANTLR AHILEVTNGC DVFDCVATYA RRRQRGICVL SGSGTVTNVS IRQPSAAGAV VTLQGTFEIL SLSGSFLPPP APPGATSLTI FLAGGQGQVV
201: GGSVVGELTA AGPVIVIAAS FTNVAYERLP LEEDEQQQQL GGGSNGGGNL FPEVAAGGGG GLPFFNLPMN MQPNVQLPVE GWPGNSGGRG PF
Arabidopsis Description
AHL23AT-hook motif nuclear-localized protein 23 [Source:UniProtKB/Swiss-Prot;Acc:O23620]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.