Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d005923_P001 | Maize | nucleus | 84.68 | 81.98 |
| OQU89633 | Sorghum | cytosol | 82.28 | 77.4 |
| Os09t0464300-00 | Rice | nucleus | 71.77 | 71.56 |
| TraesCS5D01G252500.1 | Wheat | cytosol | 68.17 | 67.76 |
| TraesCS5B01G243200.1 | Wheat | cytosol, endoplasmic reticulum, nucleus | 67.87 | 67.26 |
| TraesCS5A01G245800.1 | Wheat | cytosol, endoplasmic reticulum, nucleus | 68.47 | 67.06 |
| GSMUA_Achr7P19000_001 | Banana | cytosol, plasma membrane, plastid | 36.04 | 64.52 |
| GSMUA_Achr8P23410_001 | Banana | cytosol | 35.74 | 58.05 |
| GSMUA_Achr10P... | Banana | nucleus | 47.75 | 56.99 |
| GSMUA_Achr3P06770_001 | Banana | cytosol | 34.23 | 50.22 |
| Zm00001d031826_P001 | Maize | cytosol, endoplasmic reticulum, nucleus | 43.24 | 48.98 |
| GSMUA_AchrUn_... | Banana | nucleus | 48.65 | 48.36 |
| KRH72453 | Soybean | nucleus | 37.84 | 46.49 |
| KRH62181 | Soybean | nucleus | 38.44 | 45.71 |
| KRH52892 | Soybean | nucleus | 38.44 | 45.07 |
| VIT_18s0001g07380.t01 | Wine grape | nucleus | 33.03 | 44.9 |
| CDY21451 | Canola | cytosol | 32.43 | 44.08 |
| CDX83182 | Canola | cytosol | 32.43 | 44.08 |
| PGSC0003DMT400024250 | Potato | cytosol, plastid | 35.14 | 43.49 |
| Bra000593.1-P | Field mustard | cytosol | 33.93 | 42.97 |
| CDY45266 | Canola | plastid | 26.43 | 42.93 |
| Bra026211.1-P | Field mustard | plastid | 26.43 | 42.93 |
| AT1G14490.2 | Thale cress | plastid | 28.83 | 42.67 |
| KRH16838 | Soybean | nucleus | 32.73 | 42.58 |
| AT5G49700.1 | Thale cress | nucleus | 33.93 | 40.94 |
| Zm00001d018508_P001 | Maize | cytosol | 28.23 | 38.37 |
| PGSC0003DMT400005182 | Potato | nucleus | 30.63 | 38.06 |
| Solyc12g087950.1.1 | Tomato | nucleus | 30.33 | 37.97 |
| Solyc04g076220.2.1 | Tomato | nucleus | 38.14 | 37.8 |
| Zm00001d028577_P001 | Maize | nucleus | 30.93 | 37.73 |
| Zm00001d031887_P001 | Maize | nucleus | 30.03 | 37.17 |
| Zm00001d049906_P001 | Maize | nucleus | 29.43 | 36.98 |
| Zm00001d039249_P001 | Maize | cytosol | 16.52 | 35.48 |
| CDY65376 | Canola | nucleus | 28.53 | 34.55 |
| Zm00001d042060_P001 | Maize | plastid | 24.92 | 33.88 |
| Zm00001d024537_P001 | Maize | cytosol, endoplasmic reticulum, nucleus | 28.53 | 32.65 |
| Zm00001d046696_P001 | Maize | cytosol, nucleus, peroxisome | 26.43 | 32.47 |
| Zm00001d009031_P001 | Maize | mitochondrion, plastid | 19.52 | 32.02 |
| Zm00001d051620_P001 | Maize | plastid | 30.03 | 31.55 |
| Zm00001d002495_P001 | Maize | cytosol, nucleus, peroxisome | 29.13 | 31.39 |
| Zm00001d049521_P001 | Maize | cytosol, endoplasmic reticulum, peroxisome | 27.93 | 31.1 |
| Zm00001d026035_P001 | Maize | cytosol, nucleus, peroxisome | 28.83 | 30.97 |
| Zm00001d017825_P001 | Maize | plastid | 30.03 | 30.86 |
| Zm00001d045427_P001 | Maize | cytosol, nucleus, plasma membrane | 31.23 | 30.5 |
| Zm00001d045928_P001 | Maize | nucleus | 27.93 | 30.39 |
| Zm00001d036088_P001 | Maize | extracellular | 25.53 | 30.36 |
| Zm00001d016132_P001 | Maize | nucleus | 26.73 | 28.8 |
| Zm00001d053429_P001 | Maize | nucleus | 27.33 | 28.44 |
Protein Annotations
| EnsemblPlants:Zm00001d020768_P001 | EnsemblPlants:Zm00001d020768_T001 | EnsemblPlantsGene:Zm00001d020768 | Gene3D:3.30.1330.80 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:IPR005175 | InterPro:PPC_dom | PANTHER:PTHR31100 | PANTHER:PTHR31100:SF41 |
| PFAM:PF03479 | PFscan:PS51742 | ProteinID:ONM55550.1 | SEG:seg | SUPFAM:SSF117856 | UniParc:UPI0008449EDD |
| UniProt:A0A1D6I633 | MapMan:35.1 | : | : | : | : |
Description
Barren stalk fastigiate1-related-1%3B DNA-binding protein
Coordinates
chr7:-:131675954..131676955
Molecular Weight (calculated)
34252.8 Da
IEP (calculated)
7.859
GRAVY (calculated)
-0.228
Length
333 amino acids
Sequence
(BLAST)
(BLAST)
001: MDVPPVHFST PPPPPCQQQQ QHGGHGEQQK LERFSDEVDS RLSAEQKEPA SGGALVVSVS GGGDGASIEL SKKRRGRPPG SKNKPKPPVV ITREAEPAAA
101: MRPHVIEIPC GCDVADALAR FAARRNLGIC VLAGTGAVAN VSLRHPMPCG GGGAPTAIML HGQYEILSIS ATFLPPAISA VAPQAAAAAA CLSISLAGPH
201: GQIVGGAVAG PLYAASTVVV VAAAFTNPTF HRLPADDDAS VSVSVSLSAG SGDPADEHRG GHQHPVPVEP PPRERHRPHV VRRKPAPHLA SAAPSVEPCG
301: PPAAPIYAAC HPQPQDVMWP PPNRAPHPPP PPY
101: MRPHVIEIPC GCDVADALAR FAARRNLGIC VLAGTGAVAN VSLRHPMPCG GGGAPTAIML HGQYEILSIS ATFLPPAISA VAPQAAAAAA CLSISLAGPH
201: GQIVGGAVAG PLYAASTVVV VAAAFTNPTF HRLPADDDAS VSVSVSLSAG SGDPADEHRG GHQHPVPVEP PPRERHRPHV VRRKPAPHLA SAAPSVEPCG
301: PPAAPIYAAC HPQPQDVMWP PPNRAPHPPP PPY
001: MKGEYREQKS NEMFSKLPHH QQQQQQQQQQ HSLTSHFHLS STVTPTVDDS SIEVVRRPRG RPPGSKNKPK PPVFVTRDTD PPMSPYILEV PSGNDVVEAI
101: NRFCRRKSIG VCVLSGSGSV ANVTLRQPSP AALGSTITFH GKFDLLSVSA TFLPPPPRTS LSPPVSNFFT VSLAGPQGQI IGGFVAGPLI SAGTVYVIAA
201: SFNNPSYHRL PAEEEQKHSA GTGEREGQSP PVSGGGEESG QMAGSGGESC GVSMYSCHMG GSDVIWAPTA RAPPPY
101: NRFCRRKSIG VCVLSGSGSV ANVTLRQPSP AALGSTITFH GKFDLLSVSA TFLPPPPRTS LSPPVSNFFT VSLAGPQGQI IGGFVAGPLI SAGTVYVIAA
201: SFNNPSYHRL PAEEEQKHSA GTGEREGQSP PVSGGGEESG QMAGSGGESC GVSMYSCHMG GSDVIWAPTA RAPPPY
Arabidopsis Description
AHL17AT-hook motif nuclear-localized protein 17 [Source:UniProtKB/Swiss-Prot;Acc:Q9LTA2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.