Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d005923_P001 | Maize | nucleus | 81.92 | 84.3 |
| Zm00001d020768_P001 | Maize | cytosol | 77.4 | 82.28 |
| Os09t0464300-00 | Rice | nucleus | 68.64 | 72.75 |
| TraesCS5D01G252500.1 | Wheat | cytosol | 66.67 | 70.45 |
| TraesCS5A01G245800.1 | Wheat | cytosol, endoplasmic reticulum, nucleus | 66.95 | 69.71 |
| TraesCS5B01G243200.1 | Wheat | cytosol, endoplasmic reticulum, nucleus | 66.1 | 69.64 |
| GSMUA_Achr7P19000_001 | Banana | cytosol, plasma membrane, plastid | 33.9 | 64.52 |
| GSMUA_Achr8P23410_001 | Banana | cytosol | 34.18 | 59.02 |
| GSMUA_Achr10P... | Banana | nucleus | 43.79 | 55.56 |
| KXG25333 | Sorghum | cytosol | 50.85 | 54.05 |
| GSMUA_Achr3P06770_001 | Banana | cytosol | 33.62 | 52.42 |
| GSMUA_AchrUn_... | Banana | nucleus | 47.74 | 50.45 |
| KRH72453 | Soybean | nucleus | 34.18 | 44.65 |
| KRH62181 | Soybean | nucleus | 35.31 | 44.64 |
| VIT_18s0001g07380.t01 | Wine grape | nucleus | 30.79 | 44.49 |
| KRH52892 | Soybean | nucleus | 35.31 | 44.01 |
| KRH16838 | Soybean | nucleus | 30.79 | 42.58 |
| CDX83182 | Canola | cytosol | 29.38 | 42.45 |
| CDY21451 | Canola | cytosol | 29.38 | 42.45 |
| PGSC0003DMT400024250 | Potato | cytosol, plastid | 32.2 | 42.38 |
| Bra026211.1-P | Field mustard | plastid | 24.29 | 41.95 |
| CDY45266 | Canola | plastid | 24.29 | 41.95 |
| Bra000593.1-P | Field mustard | cytosol | 31.07 | 41.83 |
| AT1G14490.2 | Thale cress | plastid | 26.55 | 41.78 |
| AT5G49700.1 | Thale cress | nucleus | 31.36 | 40.22 |
| Solyc12g087950.1.1 | Tomato | nucleus | 28.81 | 38.35 |
| Solyc04g076220.2.1 | Tomato | nucleus | 36.16 | 38.1 |
| PGSC0003DMT400005182 | Potato | nucleus | 28.81 | 38.06 |
| EER95114 | Sorghum | nucleus | 29.1 | 37.87 |
| KXG25365 | Sorghum | nucleus | 26.84 | 35.19 |
| OQU88209 | Sorghum | peroxisome | 24.58 | 34.8 |
| CDY65376 | Canola | nucleus | 26.55 | 34.18 |
| KXG24494 | Sorghum | nucleus | 27.97 | 33.22 |
| OQU85972 | Sorghum | cytosol | 27.68 | 33.0 |
| EER88668 | Sorghum | cytosol | 25.14 | 32.96 |
| EES12751 | Sorghum | cytosol, nucleus, peroxisome | 28.81 | 32.69 |
| EER99980 | Sorghum | plastid | 18.36 | 30.81 |
| EES05630 | Sorghum | cytosol, mitochondrion, nucleus, plastid | 27.68 | 29.88 |
| KXG19929 | Sorghum | nucleus | 26.55 | 29.56 |
| EER89149 | Sorghum | cytosol, nucleus, plastid | 28.81 | 29.23 |
| EES04848 | Sorghum | nucleus | 26.27 | 28.44 |
Protein Annotations
| EnsemblPlants:OQU89633 | EnsemblPlantsGene:SORBI_3002G230301 | EntrezGene:8083247 | Gene3D:3.30.1330.80 | InterPro:IPR005175 | InterPro:PPC_dom |
| PANTHER:PTHR31100 | PANTHER:PTHR31100:SF41 | PFAM:PF03479 | PFscan:PS51742 | ProteinID:OQU89633 | ProteinID:OQU89633.1 |
| RefSeq:XP_002462506.1 | SEG:seg | SUPFAM:SSF117856 | UniParc:UPI0001A84196 | UniProt:A0A1W0W5L1 | MapMan:35.1 |
Description
hypothetical protein
Coordinates
chr2:-:62176041..62177105
Molecular Weight (calculated)
36341.1 Da
IEP (calculated)
7.171
GRAVY (calculated)
-0.229
Length
354 amino acids
Sequence
(BLAST)
(BLAST)
001: MSLGKRDMSQ ERLYQDRKDV PPVHFTTPPP PSHHHQQQLE CFSDEVDSRG SAEQKEPASG GAGALVVSGG GGDEASMELS KKRRGRPPGS KNKPKPPVVI
101: TREAEPAAAM RPHVIEIPCG CDVADALARF AARRNLGICV LAGTGAVANV SLRHPMSGGV AVGGGGGGAP TTAIVFHGQY EILSISATFL PPAMSAVAPQ
201: AAAAAACLSI SLAGPHGQVV GGAVVGPLYA ASAVVLVAAA FTNPTFHRLP LPPDDDAAVS VSVSLSAGSG GDHAADEHHR GVAHQHQHPG EQPPPQEHHR
301: PLAVRRQAPP HLASASAAQP VEPCGGPPAV PIYTACHPQP QDVIWPPPPP PPPY
101: TREAEPAAAM RPHVIEIPCG CDVADALARF AARRNLGICV LAGTGAVANV SLRHPMSGGV AVGGGGGGAP TTAIVFHGQY EILSISATFL PPAMSAVAPQ
201: AAAAAACLSI SLAGPHGQVV GGAVVGPLYA ASAVVLVAAA FTNPTFHRLP LPPDDDAAVS VSVSLSAGSG GDHAADEHHR GVAHQHQHPG EQPPPQEHHR
301: PLAVRRQAPP HLASASAAQP VEPCGGPPAV PIYTACHPQP QDVIWPPPPP PPPY
001: MKGEYREQKS NEMFSKLPHH QQQQQQQQQQ HSLTSHFHLS STVTPTVDDS SIEVVRRPRG RPPGSKNKPK PPVFVTRDTD PPMSPYILEV PSGNDVVEAI
101: NRFCRRKSIG VCVLSGSGSV ANVTLRQPSP AALGSTITFH GKFDLLSVSA TFLPPPPRTS LSPPVSNFFT VSLAGPQGQI IGGFVAGPLI SAGTVYVIAA
201: SFNNPSYHRL PAEEEQKHSA GTGEREGQSP PVSGGGEESG QMAGSGGESC GVSMYSCHMG GSDVIWAPTA RAPPPY
101: NRFCRRKSIG VCVLSGSGSV ANVTLRQPSP AALGSTITFH GKFDLLSVSA TFLPPPPRTS LSPPVSNFFT VSLAGPQGQI IGGFVAGPLI SAGTVYVIAA
201: SFNNPSYHRL PAEEEQKHSA GTGEREGQSP PVSGGGEESG QMAGSGGESC GVSMYSCHMG GSDVIWAPTA RAPPPY
Arabidopsis Description
AHL17AT-hook motif nuclear-localized protein 17 [Source:UniProtKB/Swiss-Prot;Acc:Q9LTA2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.