Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- plasma membrane 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr8P23410_001 | Banana | cytosol | 76.88 | 69.76 |
| GSMUA_Achr10P... | Banana | nucleus | 82.8 | 55.2 |
| GSMUA_Achr3P06770_001 | Banana | cytosol | 65.59 | 53.74 |
| GSMUA_AchrUn_... | Banana | cytosol | 39.78 | 44.31 |
| GSMUA_Achr11P... | Banana | cytosol | 39.78 | 43.02 |
| GSMUA_AchrUn_... | Banana | nucleus | 73.12 | 40.6 |
| CDY45266 | Canola | plastid | 44.09 | 40.0 |
| Bra026211.1-P | Field mustard | plastid | 44.09 | 40.0 |
| AT1G14490.2 | Thale cress | plastid | 47.31 | 39.11 |
| KRH62181 | Soybean | nucleus | 57.53 | 38.21 |
| CDY21451 | Canola | cytosol | 50.0 | 37.96 |
| CDX83182 | Canola | cytosol | 50.0 | 37.96 |
| KRH52892 | Soybean | nucleus | 57.53 | 37.68 |
| Bra000593.1-P | Field mustard | cytosol | 53.23 | 37.64 |
| Os09t0464300-00 | Rice | nucleus | 67.2 | 37.43 |
| PGSC0003DMT400024250 | Potato | cytosol, plastid | 53.23 | 36.8 |
| KRH16838 | Soybean | nucleus | 50.54 | 36.72 |
| KRH72453 | Soybean | nucleus | 52.69 | 36.16 |
| Zm00001d020768_P001 | Maize | cytosol | 64.52 | 36.04 |
| TraesCS5D01G252500.1 | Wheat | cytosol | 63.44 | 35.22 |
| Os08t0478466-01 | Rice | nucleus | 61.29 | 35.19 |
| AT5G49700.1 | Thale cress | nucleus | 52.15 | 35.14 |
| TraesCS5B01G243200.1 | Wheat | cytosol, endoplasmic reticulum, nucleus | 63.44 | 35.12 |
| TraesCS5A01G245800.1 | Wheat | cytosol, endoplasmic reticulum, nucleus | 62.9 | 34.41 |
| OQU89633 | Sorghum | cytosol | 64.52 | 33.9 |
| Zm00001d005923_P001 | Maize | nucleus | 62.37 | 33.72 |
| Zm00001d031826_P001 | Maize | cytosol, endoplasmic reticulum, nucleus | 53.23 | 33.67 |
| KXG25333 | Sorghum | cytosol | 58.6 | 32.73 |
| VIT_18s0001g07380.t01 | Wine grape | nucleus | 43.01 | 32.65 |
| PGSC0003DMT400005182 | Potato | nucleus | 46.24 | 32.09 |
| Solyc12g087950.1.1 | Tomato | nucleus | 45.16 | 31.58 |
| GSMUA_Achr2P04080_001 | Banana | cytosol | 39.78 | 31.49 |
| CDY65376 | Canola | nucleus | 46.24 | 31.27 |
| GSMUA_Achr5P19550_001 | Banana | cytosol | 44.62 | 30.74 |
| Solyc04g076220.2.1 | Tomato | nucleus | 53.76 | 29.76 |
| GSMUA_Achr5P28720_001 | Banana | mitochondrion, peroxisome, plastid | 41.4 | 29.39 |
| GSMUA_Achr9P12320_001 | Banana | plastid | 44.09 | 29.18 |
| GSMUA_Achr9P23390_001 | Banana | plastid | 39.25 | 28.74 |
| GSMUA_Achr6P04980_001 | Banana | cytosol, nucleus, plastid | 43.01 | 27.87 |
| GSMUA_Achr7P10630_001 | Banana | plastid | 43.55 | 27.84 |
| GSMUA_Achr11P... | Banana | nucleus | 43.55 | 27.55 |
| GSMUA_Achr6P01060_001 | Banana | nucleus | 41.4 | 27.5 |
| GSMUA_Achr9P28280_001 | Banana | plastid | 44.09 | 27.33 |
| GSMUA_Achr8P14790_001 | Banana | plastid | 39.78 | 26.52 |
| GSMUA_Achr10P... | Banana | cytosol, nucleus, vacuole | 43.01 | 26.23 |
| GSMUA_Achr1P19850_001 | Banana | nucleus | 41.4 | 25.08 |
| GSMUA_Achr2P03140_001 | Banana | cytosol, nucleus, vacuole | 40.86 | 24.6 |
| GSMUA_Achr1P08290_001 | Banana | nucleus | 39.78 | 24.1 |
| GSMUA_Achr7P15000_001 | Banana | nucleus | 34.95 | 23.3 |
| GSMUA_Achr5P03390_001 | Banana | nucleus | 32.26 | 23.17 |
| GSMUA_Achr3P27580_001 | Banana | cytosol, nucleus, plastid | 30.65 | 22.71 |
| GSMUA_Achr2P04780_001 | Banana | cytosol, nucleus, plastid | 30.11 | 21.96 |
| GSMUA_Achr5P13920_001 | Banana | nucleus | 18.28 | 14.98 |
| GSMUA_Achr3P11300_001 | Banana | nucleus | 14.52 | 11.79 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr7P19000_001 | EnsemblPlants:GSMUA_Achr7T19000_001 | EnsemblPlantsGene:GSMUA_Achr7G19000_001 | Gene3D:3.30.1330.80 | InterPro:AT-hook_nuclear | InterPro:IPR005175 |
| InterPro:PPC_dom | PANTHER:PTHR31100 | PANTHER:PTHR31100:SF1 | PFAM:PF03479 | PFscan:PS51742 | PIRSF:PIRSF016021 |
| SEG:seg | SUPFAM:SSF117856 | TMHMM:TMhelix | UniParc:UPI0002959E7E | UniProt:M0TIT7 | MapMan:35.1 |
Description
Putative uncharacterized protein [Source:GMGC_GENE;Acc:GSMUA_Achr7G19000_001]
Coordinates
chr7:-:21801291..21802202
Molecular Weight (calculated)
18572.5 Da
IEP (calculated)
7.634
GRAVY (calculated)
0.437
Length
186 amino acids
Sequence
(BLAST)
(BLAST)
001: MRPHVLEIPA GHDVVDSLAG FSRRRNLGIC VLSGTGAVAN VTLRQPHLGG APLSAGAPAT IVFRGRFEIL SISATFLPPA MEALCPAAAG GLSISLAGPQ
101: GQIVGGTVAG PLVAAGMVVV VAAAFSNPTF HRLPVEDDVS VSVSVSGGGG PSPTAAVSSG MSLYSSHLPS DVIWAPTARP PPPPPY
101: GQIVGGTVAG PLVAAGMVVV VAAAFSNPTF HRLPVEDDVS VSVSVSGGGG PSPTAAVSSG MSLYSSHLPS DVIWAPTARP PPPPPY
001: METVGRPRGR PRGSKNKPKA PIFVTIDPPM SPYILEVPSG NDVVEALNRF CRGKAIGFCV LSGSGSVADV TLRQPSPAAP GSTITFHGKF DLLSVSATFL
101: PPLPPTSLSP PVSNFFTVSL AGPQGKVIGG FVAGPLVAAG TVYFVATSFK NPSYHRLPAT EEEQRNSAEG EEEGQSPPVS GGGGESMYVG GSDVIWDPNA
201: KAPSPY
101: PPLPPTSLSP PVSNFFTVSL AGPQGKVIGG FVAGPLVAAG TVYFVATSFK NPSYHRLPAT EEEQRNSAEG EEEGQSPPVS GGGGESMYVG GSDVIWDPNA
201: KAPSPY
Arabidopsis Description
Predicted AT-hook DNA-binding family protein [Source:TAIR;Acc:AT1G14490]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.