Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 2
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX83182 | Canola | cytosol | 98.78 | 98.78 |
| Bra000593.1-P | Field mustard | cytosol | 98.37 | 91.64 |
| AT5G49700.1 | Thale cress | nucleus | 88.98 | 78.99 |
| CDY45266 | Canola | plastid | 60.82 | 72.68 |
| KRH62181 | Soybean | nucleus | 66.53 | 58.21 |
| CDY65376 | Canola | nucleus | 65.31 | 58.18 |
| KRH52892 | Soybean | nucleus | 66.53 | 57.39 |
| KRH72453 | Soybean | nucleus | 58.37 | 52.77 |
| PGSC0003DMT400024250 | Potato | cytosol, plastid | 55.92 | 50.93 |
| VIT_18s0001g07380.t01 | Wine grape | nucleus | 50.2 | 50.2 |
| GSMUA_Achr7P19000_001 | Banana | cytosol, plasma membrane, plastid | 37.96 | 50.0 |
| KRH16838 | Soybean | nucleus | 51.02 | 48.83 |
| Solyc12g087950.1.1 | Tomato | nucleus | 49.8 | 45.86 |
| PGSC0003DMT400005182 | Potato | nucleus | 49.39 | 45.15 |
| Solyc04g076220.2.1 | Tomato | nucleus | 60.0 | 43.75 |
| GSMUA_Achr10P... | Banana | nucleus | 48.57 | 42.65 |
| GSMUA_Achr8P23410_001 | Banana | cytosol | 35.51 | 42.44 |
| GSMUA_Achr3P06770_001 | Banana | cytosol | 35.1 | 37.89 |
| CDX79599 | Canola | cytosol, peroxisome, plastid | 38.37 | 34.43 |
| CDY72485 | Canola | nucleus | 38.37 | 34.43 |
| CDY23160 | Canola | cytosol, nucleus, vacuole | 39.18 | 34.41 |
| CDY12779 | Canola | cytosol, nucleus, vacuole | 39.59 | 34.4 |
| CDY59041 | Canola | cytosol, nucleus, peroxisome | 39.59 | 33.92 |
| CDY20404 | Canola | nucleus | 37.14 | 33.58 |
| CDX90445 | Canola | plastid | 37.55 | 33.58 |
| CDY41211 | Canola | plastid | 40.41 | 33.56 |
| Os09t0464300-00 | Rice | nucleus | 45.71 | 33.53 |
| CDY68242 | Canola | plastid | 40.41 | 33.33 |
| CDY53687 | Canola | nucleus | 40.41 | 33.22 |
| CDY60321 | Canola | plastid | 40.0 | 33.11 |
| CDY45983 | Canola | nucleus | 38.78 | 32.99 |
| Zm00001d020768_P001 | Maize | cytosol | 44.08 | 32.43 |
| CDX78802 | Canola | cytosol | 38.37 | 32.3 |
| TraesCS5D01G252500.1 | Wheat | cytosol | 44.08 | 32.24 |
| TraesCS5B01G243200.1 | Wheat | cytosol, endoplasmic reticulum, nucleus | 44.08 | 32.14 |
| Zm00001d005923_P001 | Maize | nucleus | 44.9 | 31.98 |
| CDY02949 | Canola | plastid | 40.0 | 31.92 |
| CDY54780 | Canola | cytosol | 37.96 | 31.85 |
| CDX76085 | Canola | plastid | 39.59 | 31.6 |
| TraesCS5A01G245800.1 | Wheat | cytosol, endoplasmic reticulum, nucleus | 43.67 | 31.47 |
| CDX87591 | Canola | nucleus | 35.92 | 31.43 |
| GSMUA_AchrUn_... | Banana | nucleus | 42.45 | 31.04 |
| CDX79838 | Canola | plastid | 32.65 | 30.77 |
| CDY53650 | Canola | plastid | 32.65 | 30.77 |
| CDY70947 | Canola | plastid | 32.65 | 30.65 |
| CDY64701 | Canola | nucleus | 38.78 | 30.55 |
| CDY14862 | Canola | plastid | 32.24 | 30.27 |
| CDX88286 | Canola | cytosol, endoplasmic reticulum, nucleus | 33.88 | 30.07 |
| CDY49327 | Canola | cytosol, endoplasmic reticulum, nucleus | 38.37 | 29.94 |
| Zm00001d031826_P001 | Maize | cytosol, endoplasmic reticulum, nucleus | 35.92 | 29.93 |
| CDY21124 | Canola | cytosol, endoplasmic reticulum, peroxisome | 35.1 | 29.86 |
| CDX69136 | Canola | cytosol, nucleus, peroxisome | 36.73 | 29.8 |
| CDY18931 | Canola | nucleus | 37.55 | 29.77 |
| KXG25333 | Sorghum | cytosol | 40.41 | 29.73 |
| CDX84222 | Canola | cytosol | 23.27 | 29.69 |
| CDX74739 | Canola | nucleus | 37.55 | 29.68 |
| Os08t0478466-01 | Rice | nucleus | 39.18 | 29.63 |
| CDX75499 | Canola | cytosol, nucleus, peroxisome | 36.33 | 29.47 |
| CDY30003 | Canola | cytosol, nucleus, peroxisome, plastid | 34.69 | 29.41 |
| OQU89633 | Sorghum | cytosol | 42.45 | 29.38 |
| CDY41289 | Canola | nucleus | 37.55 | 29.21 |
| CDX82978 | Canola | cytosol, nucleus, plastid | 37.55 | 29.21 |
| CDY31677 | Canola | cytosol | 23.27 | 28.93 |
| CDX96613 | Canola | nucleus | 35.51 | 28.9 |
| CDY37040 | Canola | nucleus | 36.33 | 28.9 |
| CDY27387 | Canola | nucleus | 36.33 | 28.53 |
| CDY33658 | Canola | nucleus | 33.88 | 28.42 |
| CDX68095 | Canola | cytosol | 31.02 | 28.15 |
| CDY04391 | Canola | nucleus | 37.55 | 28.13 |
| CDX98771 | Canola | nucleus | 36.33 | 28.08 |
| CDX85952 | Canola | cytosol | 31.02 | 27.94 |
| CDY31511 | Canola | nucleus | 30.61 | 27.88 |
| CDY01347 | Canola | nucleus | 30.61 | 27.57 |
| CDY31858 | Canola | nucleus | 30.61 | 27.47 |
| CDX94128 | Canola | nucleus | 36.33 | 27.22 |
| CDY29494 | Canola | nucleus | 29.8 | 26.64 |
Protein Annotations
| Gene3D:3.30.1330.80 | MapMan:35.1 | UniProt:A0A078G7R3 | InterPro:AT-hook_nuclear | EnsemblPlants:CDY21451 | ProteinID:CDY21451 |
| ProteinID:CDY21451.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003680 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| EnsemblPlantsGene:GSBRNA2T00015854001 | InterPro:IPR005175 | PFAM:PF03479 | PIRSF:PIRSF016021 | InterPro:PPC_dom | PFscan:PS51742 |
| PANTHER:PTHR31100 | PANTHER:PTHR31100:SF1 | SUPFAM:SSF117856 | UniParc:UPI0004EED11B | SEG:seg | : |
Description
BnaC03g27460DAT-hook motif nuclear-localized protein [Source:UniProtKB/TrEMBL;Acc:A0A078G7R3]
Coordinates
chrLK032121:-:163698..164628
Molecular Weight (calculated)
25807.6 Da
IEP (calculated)
8.841
GRAVY (calculated)
-0.273
Length
245 amino acids
Sequence
(BLAST)
(BLAST)
001: MKGEGNEMFP KLPQNHSLSS HFNLPATIAV DDSSIEVVRR PRGRPPGSKN KPKPQVYVTR DTEPPMSPYI LEVPSGNDVV EAINRFCRRK SIGVCVLSGS
101: GSVANITLRQ PSPAAPGSTI TFHGKFDLLS VSATFLPPPP RTSLSPPVAN FFTVSLAGPQ GQIIGGFVAG PLISAGTVYV IAASFNNPSY HRLPAEEEHR
201: HSISARAGEG DGQSPPVSGG GGDCHMGTHG SDVIWAPTAR APPPY
101: GSVANITLRQ PSPAAPGSTI TFHGKFDLLS VSATFLPPPP RTSLSPPVAN FFTVSLAGPQ GQIIGGFVAG PLISAGTVYV IAASFNNPSY HRLPAEEEHR
201: HSISARAGEG DGQSPPVSGG GGDCHMGTHG SDVIWAPTAR APPPY
001: MKGEYREQKS NEMFSKLPHH QQQQQQQQQQ HSLTSHFHLS STVTPTVDDS SIEVVRRPRG RPPGSKNKPK PPVFVTRDTD PPMSPYILEV PSGNDVVEAI
101: NRFCRRKSIG VCVLSGSGSV ANVTLRQPSP AALGSTITFH GKFDLLSVSA TFLPPPPRTS LSPPVSNFFT VSLAGPQGQI IGGFVAGPLI SAGTVYVIAA
201: SFNNPSYHRL PAEEEQKHSA GTGEREGQSP PVSGGGEESG QMAGSGGESC GVSMYSCHMG GSDVIWAPTA RAPPPY
101: NRFCRRKSIG VCVLSGSGSV ANVTLRQPSP AALGSTITFH GKFDLLSVSA TFLPPPPRTS LSPPVSNFFT VSLAGPQGQI IGGFVAGPLI SAGTVYVIAA
201: SFNNPSYHRL PAEEEQKHSA GTGEREGQSP PVSGGGEESG QMAGSGGESC GVSMYSCHMG GSDVIWAPTA RAPPPY
Arabidopsis Description
AHL17AT-hook motif nuclear-localized protein 17 [Source:UniProtKB/Swiss-Prot;Acc:Q9LTA2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.