Factsheet for GSMUA_Achr10P30210_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P19000_001	Banana	cytosol, plasma membrane, plastid	55.2	82.8
GSMUA_Achr8P23410_001	Banana	cytosol	48.75	66.34
GSMUA_AchrUn_...	Banana	nucleus	67.03	55.82
GSMUA_Achr3P06770_001	Banana	cytosol	42.29	51.98
Os09t0464300-00	Rice	nucleus	60.57	50.6
KRH72453	Soybean	nucleus	47.67	49.08
KRH62181	Soybean	nucleus	49.1	48.93
CDX83182	Canola	cytosol	42.65	48.57
CDY21451	Canola	cytosol	42.65	48.57
Bra026211.1-P	Field mustard	plastid	35.48	48.29
KRH52892	Soybean	nucleus	48.75	47.89
CDY45266	Canola	plastid	35.13	47.8
TraesCS5D01G252500.1	Wheat	cytosol	57.35	47.76
Zm00001d020768_P001	Maize	cytosol	56.99	47.75
TraesCS5B01G243200.1	Wheat	cytosol, endoplasmic reticulum, nucleus	57.35	47.62
Bra000593.1-P	Field mustard	cytosol	44.8	47.53
TraesCS5A01G245800.1	Wheat	cytosol, endoplasmic reticulum, nucleus	57.71	47.35
KRH16838	Soybean	nucleus	43.37	47.27
AT1G14490.2	Thale cress	plastid	37.63	46.67
VIT_18s0001g07380.t01	Wine grape	nucleus	40.86	46.53
PGSC0003DMT400024250	Potato	cytosol, plastid	44.44	46.1
Zm00001d005923_P001	Maize	nucleus	56.27	45.64
Os08t0478466-01	Rice	nucleus	52.33	45.06
AT5G49700.1	Thale cress	nucleus	44.44	44.93
OQU89633	Sorghum	cytosol	55.56	43.79
GSMUA_AchrUn_...	Banana	cytosol	25.45	42.52
GSMUA_Achr11P...	Banana	cytosol	26.16	42.44
PGSC0003DMT400005182	Potato	nucleus	39.78	41.42
KXG25333	Sorghum	cytosol	49.1	41.14
Solyc04g076220.2.1	Tomato	nucleus	49.46	41.07
Solyc12g087950.1.1	Tomato	nucleus	38.71	40.6
Zm00001d031826_P001	Maize	cytosol, endoplasmic reticulum, nucleus	41.58	39.46
GSMUA_Achr5P19550_001	Banana	cytosol	37.99	39.26
GSMUA_Achr2P04080_001	Banana	cytosol	32.62	38.72
CDY65376	Canola	nucleus	37.63	38.18
GSMUA_Achr9P23390_001	Banana	plastid	34.41	37.8
GSMUA_Achr9P12320_001	Banana	plastid	36.56	36.3
GSMUA_Achr5P28720_001	Banana	mitochondrion, peroxisome, plastid	33.69	35.88
GSMUA_Achr6P04980_001	Banana	cytosol, nucleus, plastid	35.48	34.49
GSMUA_Achr9P28280_001	Banana	plastid	36.56	34.0
GSMUA_Achr6P01060_001	Banana	nucleus	34.05	33.93
GSMUA_Achr8P14790_001	Banana	plastid	33.69	33.69
GSMUA_Achr11P...	Banana	nucleus	35.48	33.67
GSMUA_Achr7P10630_001	Banana	plastid	34.05	32.65
GSMUA_Achr1P19850_001	Banana	nucleus	35.84	32.57
GSMUA_Achr3P27580_001	Banana	cytosol, nucleus, plastid	29.03	32.27
GSMUA_Achr5P03390_001	Banana	nucleus	29.39	31.66
GSMUA_Achr7P15000_001	Banana	nucleus	31.54	31.54
GSMUA_Achr2P04780_001	Banana	cytosol, nucleus, plastid	28.67	31.37
GSMUA_Achr2P03140_001	Banana	cytosol, nucleus, vacuole	34.41	31.07
GSMUA_Achr10P...	Banana	cytosol, nucleus, vacuole	33.33	30.49
GSMUA_Achr1P08290_001	Banana	nucleus	32.97	29.97
GSMUA_Achr5P13920_001	Banana	nucleus	20.79	25.55
GSMUA_Achr3P11300_001	Banana	nucleus	19.35	23.58

Protein Annotations

Gene3D:3.30.1330.80	MapMan:35.1	InterPro:AT-hook_nuclear	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003680	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr10G30210_001	EnsemblPlants:GSMUA_Achr10P30210_001	EnsemblPlants:GSMUA_Achr10T30210_001	InterPro:IPR005175
UniProt:M0RMP5	PFAM:PF03479	PIRSF:PIRSF016021	InterPro:PPC_dom	PFscan:PS51742	PANTHER:PTHR31100
PANTHER:PTHR31100:SF1	SUPFAM:SSF117856	TMHMM:TMhelix	UniParc:UPI0002957425	SEG:seg	:

Description

Putative uncharacterized protein [Source:GMGC_GENE;Acc:GSMUA_Achr10G30210_001]

Coordinates

chr10:-:32448195..32449121

Molecular Weight (calculated)

29105.8 Da

IEP (calculated)

9.820

GRAVY (calculated)

-0.135

Length

279 amino acids

Sequence
(BLAST)

001: MKDKLFQHHY LQQHQQQQHQ KSLSDEVDSS KSSGENKKVK FDEQRERTGG DGSTIEVVKR PRGRPPGSKN KPKVPVVITR EEEPSAVMRP HVLEIPAGHD
101: VADSLARFSQ RRNLGICVLS GIGAVANVTL RQPHLGLVPQ PAGAPATIVF RGRFEILSIT GTFLTPAMAE VSPAAASSLS ISLAGPQAQI VGGTVAGPLV
201: AAGTVVVVAA AFSNPTFHRL PAEDDVSASV SITGGGVLAT TASAAMAVGS SGMSVYSGGH VPSDVIWAPT ARPPPPPPY

Best Arabidopsis Sequence Match ( AT5G49700.1 )
(BLAST)

001: MKGEYREQKS NEMFSKLPHH QQQQQQQQQQ HSLTSHFHLS STVTPTVDDS SIEVVRRPRG RPPGSKNKPK PPVFVTRDTD PPMSPYILEV PSGNDVVEAI
101: NRFCRRKSIG VCVLSGSGSV ANVTLRQPSP AALGSTITFH GKFDLLSVSA TFLPPPPRTS LSPPVSNFFT VSLAGPQGQI IGGFVAGPLI SAGTVYVIAA
201: SFNNPSYHRL PAEEEQKHSA GTGEREGQSP PVSGGGEESG QMAGSGGESC GVSMYSCHMG GSDVIWAPTA RAPPPY

Arabidopsis Description

AHL17AT-hook motif nuclear-localized protein 17 [Source:UniProtKB/Swiss-Prot;Acc:Q9LTA2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.