Factsheet for GSMUA_Achr9P12320_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 4
mitochondrion 1
cytosol 1
plastid 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G306100.1	Wheat	plastid	69.39	59.27
TraesCS6D01G258400.1	Wheat	plastid	69.39	59.27
Zm00001d051620_P001	Maize	plastid	66.19	58.68
Zm00001d017825_P001	Maize	plastid	67.62	58.64
Os02t0713700-01	Rice	cytosol, mitochondrion, nucleus, plastid	70.11	58.63
HORVU6Hr1G070090.1	Barley	plastid	69.04	58.61
EES05630	Sorghum	cytosol, mitochondrion, nucleus, plastid	68.33	58.54
TraesCS6A01G277700.1	Wheat	plastid	67.62	58.1
Zm00001d045928_P001	Maize	nucleus	62.99	57.84
KXG19929	Sorghum	nucleus	65.12	57.55
Os06t0326900-01	Rice	nucleus	64.06	55.9
HORVU7Hr1G046930.1	Barley	cytosol, nucleus, peroxisome	62.28	55.38
TraesCS7A01G225700.1	Wheat	nucleus	63.35	55.11
GSMUA_AchrUn_...	Banana	cytosol	32.74	55.09
TraesCS7B01G193900.1	Wheat	cytosol, nucleus, peroxisome	62.63	54.66
KRH51551	Soybean	plastid	39.5	54.41
Solyc04g082810.2.1	Tomato	cytosol, nucleus, peroxisome	47.33	54.29
TraesCS7D01G228800.1	Wheat	nucleus	61.21	54.09
GSMUA_Achr11P...	Banana	cytosol	32.74	53.49
PGSC0003DMT400025705	Potato	plastid	49.47	53.46
GSMUA_Achr2P04080_001	Banana	cytosol	44.48	53.19
GSMUA_Achr9P23390_001	Banana	plastid	44.84	49.61
CDY20404	Canola	nucleus	46.26	47.97
CDX87591	Canola	nucleus	47.33	47.5
GSMUA_Achr5P19550_001	Banana	cytosol	45.55	47.41
AT1G20900.1	Thale cress	nucleus	52.31	47.27
Bra012256.1-P	Field mustard	nucleus	51.96	47.25
CDY31511	Canola	nucleus	45.2	47.21
CDX96613	Canola	nucleus	50.53	47.18
CDY45983	Canola	nucleus	48.04	46.88
Bra008262.1-P	Field mustard	nucleus	47.33	46.34
Bra015738.1-P	Field mustard	nucleus	46.98	45.83
CDY31858	Canola	nucleus	44.48	45.79
CDY01347	Canola	nucleus	44.13	45.59
CDY33658	Canola	nucleus	47.33	45.55
GSMUA_Achr5P28720_001	Banana	mitochondrion, peroxisome, plastid	42.35	45.42
Bra016444.1-P	Field mustard	nucleus	50.89	45.4
CDY29494	Canola	nucleus	44.13	45.26
AT1G76500.1	Thale cress	nucleus	48.4	45.03
Zm00001d046696_P001	Maize	cytosol, nucleus, peroxisome	43.42	45.02
EER88668	Sorghum	cytosol	43.06	44.81
CDX88286	Canola	cytosol, endoplasmic reticulum, nucleus	43.77	44.57
GSMUA_Achr8P14790_001	Banana	plastid	44.13	44.44
Bra025854.1-P	Field mustard	nucleus	45.2	44.41
Bra003717.1-P	Field mustard	nucleus	45.2	44.25
GSMUA_Achr3P27580_001	Banana	cytosol, nucleus, plastid	39.5	44.22
GSMUA_Achr7P19000_001	Banana	cytosol, plasma membrane, plastid	29.18	44.09
VIT_18s0122g00590.t01	Wine grape	endoplasmic reticulum, plasma membrane	48.75	43.35
GSMUA_Achr7P15000_001	Banana	nucleus	42.7	43.01
CDX68095	Canola	cytosol	41.28	42.96
TraesCS7A01G395400.1	Wheat	cytosol	43.06	41.87
GSMUA_Achr6P01060_001	Banana	nucleus	41.64	41.79
TraesCS7B01G297300.1	Wheat	cytosol	43.42	41.78
GSMUA_Achr2P04780_001	Banana	cytosol, nucleus, plastid	37.72	41.57
GSMUA_Achr5P03390_001	Banana	nucleus	37.72	40.93
CDX85952	Canola	cytosol	39.5	40.81
GSMUA_Achr7P10630_001	Banana	plastid	40.93	39.52
GSMUA_Achr11P...	Banana	nucleus	41.28	39.46
GSMUA_Achr6P04980_001	Banana	cytosol, nucleus, plastid	40.21	39.37
GSMUA_Achr9P28280_001	Banana	plastid	41.64	39.0
GSMUA_Achr1P19850_001	Banana	nucleus	41.99	38.44
HORVU7Hr1G093230.2	Barley	cytosol	41.28	38.28
GSMUA_Achr8P23410_001	Banana	cytosol	27.76	38.05
GSMUA_Achr10P...	Banana	cytosol, nucleus, vacuole	40.93	37.7
GSMUA_Achr2P03140_001	Banana	cytosol, nucleus, vacuole	41.28	37.54
GSMUA_Achr1P08290_001	Banana	nucleus	40.93	37.46
GSMUA_Achr10P...	Banana	nucleus	36.3	36.56
GSMUA_Achr5P13920_001	Banana	nucleus	26.33	32.6
GSMUA_Achr3P06770_001	Banana	cytosol	25.27	31.28
GSMUA_AchrUn_...	Banana	nucleus	34.88	29.25
GSMUA_Achr3P11300_001	Banana	nucleus	23.13	28.38

Protein Annotations

Gene3D:3.30.1330.80	MapMan:35.2	InterPro:AT-hook_nuclear	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003680	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr9G12320_001	EnsemblPlants:GSMUA_Achr9P12320_001	EnsemblPlants:GSMUA_Achr9T12320_001	InterPro:IPR005175
UniProt:M0TZP1	PFAM:PF03479	PIRSF:PIRSF016021	InterPro:PPC_dom	PFscan:PS51742	PANTHER:PTHR31100
PANTHER:PTHR31100:SF5	SUPFAM:SSF117856	UniParc:UPI00029594D9	SEG:seg	:	:

Description

Putative uncharacterized protein Sb10g012980 [Source:GMGC_GENE;Acc:GSMUA_Achr9G12320_001]

Coordinates

chr9:-:8035502..8036347

Molecular Weight (calculated)

28156.3 Da

IEP (calculated)

10.164

GRAVY (calculated)

-0.207

Length

281 amino acids

Sequence
(BLAST)

001: MAGTESGGRS AGTGGFSRYL RPPPPSAHLQ PEKSKPSPEK RTKLSPNHGG DQQAATSAAA GSSVGPVRRP RGRPPGSKNK PKPPIVVTRD SPNALRSHVI
101: EVANGADVVE CVAEYARRRV RGVSVLSGGG AVANVALRQP GASPPGSVVA TLRGRFEILS LTGTVLPPPA PPGAGSLTVF LAGGNQGQVV GGSVVGPLVA
201: AGPVVLTAAC FSNAVYERLP LEECEEAAAA AEQGPQPVVS QSSGATAAGG ERGGSDGVPF YNLGGSYPFA GDAFGGFRPP F

Best Arabidopsis Sequence Match ( AT1G76500.1 )
(BLAST)

001: MDGGYDQSGG ASRYFHNLFR PELHHQLQPQ PQLHPLPQPQ PQPQPQQQNS DDESDSNKDP GSDPVTSGST GKRPRGRPPG SKNKPKPPVI VTRDSPNVLR
101: SHVLEVSSGA DIVESVTTYA RRRGRGVSIL SGNGTVANVS LRQPATTAAH GANGGTGGVV ALHGRFEILS LTGTVLPPPA PPGSGGLSIF LSGVQGQVIG
201: GNVVAPLVAS GPVILMAASF SNATFERLPL EDEGGEGGEG GEVGEGGGGE GGPPPATSSS PPSGAGQGQL RGNMSGYDQF AGDPHLLGWG AAAAAAPPRP
301: AF

Arabidopsis Description

AHL29AT-hook motif nuclear-localized protein 29 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9K7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.