Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 2
- cytosol 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G297300.1 | Wheat | cytosol | 95.16 | 94.18 |
| HORVU7Hr1G093230.2 | Barley | cytosol | 84.08 | 80.2 |
| EER88668 | Sorghum | cytosol | 67.47 | 72.22 |
| Zm00001d046696_P001 | Maize | cytosol, nucleus, peroxisome | 67.13 | 71.59 |
| KRH51551 | Soybean | plastid | 32.53 | 46.08 |
| GSMUA_Achr9P12320_001 | Banana | plastid | 41.87 | 43.06 |
| Solyc04g082810.2.1 | Tomato | cytosol, nucleus, peroxisome | 35.99 | 42.45 |
| TraesCS6A01G053800.1 | Wheat | nucleus | 39.45 | 40.43 |
| TraesCS4A01G312400.1 | Wheat | nucleus | 39.79 | 40.35 |
| PGSC0003DMT400025705 | Potato | plastid | 35.99 | 40.0 |
| TraesCS7A01G225700.1 | Wheat | nucleus | 43.25 | 38.7 |
| TraesCS6A01G399200.1 | Wheat | cytosol, extracellular, peroxisome | 38.75 | 38.62 |
| TraesCS6A01G277700.1 | Wheat | plastid | 43.6 | 38.53 |
| TraesCS4A01G094700.1 | Wheat | cytosol, nucleus, plastid | 33.91 | 38.28 |
| CDY20404 | Canola | nucleus | 35.29 | 37.64 |
| CDX87591 | Canola | nucleus | 35.99 | 37.14 |
| Bra015738.1-P | Field mustard | nucleus | 36.33 | 36.46 |
| CDY45983 | Canola | nucleus | 36.33 | 36.46 |
| VIT_18s0122g00590.t01 | Wine grape | endoplasmic reticulum, plasma membrane | 39.45 | 36.08 |
| TraesCS7A01G299100.1 | Wheat | cytosol, nucleus, plastid | 35.29 | 35.92 |
| Bra008262.1-P | Field mustard | nucleus | 35.64 | 35.89 |
| AT1G76500.1 | Thale cress | nucleus | 37.37 | 35.76 |
| TraesCS3A01G167300.1 | Wheat | plastid | 26.3 | 35.68 |
| CDX68095 | Canola | cytosol | 33.22 | 35.56 |
| CDX88286 | Canola | cytosol, endoplasmic reticulum, nucleus | 33.91 | 35.51 |
| CDX96613 | Canola | nucleus | 36.33 | 34.88 |
| Bra003717.1-P | Field mustard | nucleus | 34.6 | 34.84 |
| CDX85952 | Canola | cytosol | 32.53 | 34.56 |
| Bra012256.1-P | Field mustard | nucleus | 36.68 | 34.3 |
| TraesCS1A01G043100.1 | Wheat | mitochondrion, nucleus | 38.41 | 34.26 |
| CDY31511 | Canola | nucleus | 31.83 | 34.2 |
| AT1G20900.1 | Thale cress | nucleus | 36.68 | 34.08 |
| Bra016444.1-P | Field mustard | nucleus | 37.02 | 33.97 |
| TraesCS2A01G449300.1 | Wheat | cytosol, nucleus, peroxisome | 37.02 | 33.97 |
| TraesCS6A01G176200.1 | Wheat | nucleus | 35.64 | 33.33 |
| CDY29494 | Canola | nucleus | 31.49 | 33.21 |
| CDY01347 | Canola | nucleus | 31.14 | 33.09 |
| CDY31858 | Canola | nucleus | 30.8 | 32.6 |
| CDY33658 | Canola | nucleus | 32.87 | 32.53 |
| Bra025854.1-P | Field mustard | nucleus | 31.83 | 32.17 |
| TraesCS7A01G076500.1 | Wheat | cytosol, endoplasmic reticulum, nucleus | 38.41 | 32.08 |
| TraesCS4A01G374700.1 | Wheat | nucleus | 38.06 | 31.25 |
| TraesCS3A01G490800.1 | Wheat | cytosol | 28.72 | 29.43 |
| TraesCS5A01G245800.1 | Wheat | cytosol, endoplasmic reticulum, nucleus | 29.07 | 24.71 |
Protein Annotations
| EnsemblPlants:TraesCS7A01G395400.1 | EnsemblPlantsGene:TraesCS7A01G395400 | Gene3D:3.30.1330.80 | InterPro:AT-hook_nuclear | InterPro:IPR005175 | InterPro:PPC_dom |
| PANTHER:PTHR31100 | PANTHER:PTHR31100:SF20 | PFAM:PF03479 | PFscan:PS51742 | PIRSF:PIRSF016021 | SEG:seg |
| SUPFAM:SSF117856 | TIGR:cd11378 | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr7A:-:573838376..573839245
Molecular Weight (calculated)
29730.6 Da
IEP (calculated)
7.638
GRAVY (calculated)
-0.191
Length
289 amino acids
Sequence
(BLAST)
(BLAST)
001: MATGSSKWWQ GPMDFPPQPQ PQQMQQHQPL QHQHQPLQLP AVTMPAPAPA VAASPESKQQ QQQGQGQGEG QMGAAAGAIV PLRRPRGRPM GSKNKPKPPI
101: IITRDSPDAL HSHILEVAPG ADVAACVAEY ARRRGRGVCV LGASGSVVDV VVRGAASAAP LPGRFELLSM TGTVLPPPAP SEASGLAVML SAGQGQVLGG
201: CVVGPLVAAG PVTLFAATFA NAVYERLPLQ DAADADVKPD LSAAPDASVP QEVQAQQPLA ISQAMAMGAG YPDHRSPQYP WGGHQGGGI
101: IITRDSPDAL HSHILEVAPG ADVAACVAEY ARRRGRGVCV LGASGSVVDV VVRGAASAAP LPGRFELLSM TGTVLPPPAP SEASGLAVML SAGQGQVLGG
201: CVVGPLVAAG PVTLFAATFA NAVYERLPLQ DAADADVKPD LSAAPDASVP QEVQAQQPLA ISQAMAMGAG YPDHRSPQYP WGGHQGGGI
001: MDGGYDQSGG ASRYFHNLFR PELHHQLQPQ PQLHPLPQPQ PQPQPQQQNS DDESDSNKDP GSDPVTSGST GKRPRGRPPG SKNKPKPPVI VTRDSPNVLR
101: SHVLEVSSGA DIVESVTTYA RRRGRGVSIL SGNGTVANVS LRQPATTAAH GANGGTGGVV ALHGRFEILS LTGTVLPPPA PPGSGGLSIF LSGVQGQVIG
201: GNVVAPLVAS GPVILMAASF SNATFERLPL EDEGGEGGEG GEVGEGGGGE GGPPPATSSS PPSGAGQGQL RGNMSGYDQF AGDPHLLGWG AAAAAAPPRP
301: AF
101: SHVLEVSSGA DIVESVTTYA RRRGRGVSIL SGNGTVANVS LRQPATTAAH GANGGTGGVV ALHGRFEILS LTGTVLPPPA PPGSGGLSIF LSGVQGQVIG
201: GNVVAPLVAS GPVILMAASF SNATFERLPL EDEGGEGGEG GEVGEGGGGE GGPPPATSSS PPSGAGQGQL RGNMSGYDQF AGDPHLLGWG AAAAAAPPRP
301: AF
Arabidopsis Description
AHL29AT-hook motif nuclear-localized protein 29 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9K7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.