Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY29494 | Canola | nucleus | 97.77 | 95.99 |
| Bra025854.1-P | Field mustard | nucleus | 98.14 | 92.31 |
| CDY01347 | Canola | nucleus | 91.82 | 90.81 |
| CDY31858 | Canola | nucleus | 91.45 | 90.11 |
| CDY33658 | Canola | nucleus | 91.82 | 84.59 |
| AT1G20900.1 | Thale cress | nucleus | 94.05 | 81.35 |
| CDX96613 | Canola | nucleus | 90.33 | 80.73 |
| CDY20404 | Canola | nucleus | 66.91 | 66.42 |
| CDX87591 | Canola | nucleus | 68.4 | 65.71 |
| CDX88286 | Canola | cytosol, endoplasmic reticulum, nucleus | 67.29 | 65.58 |
| CDY45983 | Canola | nucleus | 67.66 | 63.19 |
| CDX68095 | Canola | cytosol | 60.97 | 60.74 |
| CDX85952 | Canola | cytosol | 60.22 | 59.56 |
| Solyc04g082810.2.1 | Tomato | cytosol, nucleus, peroxisome | 47.96 | 52.65 |
| PGSC0003DMT400025705 | Potato | plastid | 48.33 | 50.0 |
| KRH51551 | Soybean | plastid | 37.55 | 49.51 |
| GSMUA_Achr9P12320_001 | Banana | plastid | 47.21 | 45.2 |
| TraesCS6A01G277700.1 | Wheat | plastid | 53.9 | 44.34 |
| Zm00001d051620_P001 | Maize | plastid | 52.04 | 44.16 |
| Zm00001d017825_P001 | Maize | plastid | 53.16 | 44.14 |
| EES05630 | Sorghum | cytosol, mitochondrion, nucleus, plastid | 53.53 | 43.9 |
| HORVU6Hr1G070090.1 | Barley | plastid | 53.9 | 43.81 |
| TraesCS6B01G306100.1 | Wheat | plastid | 53.53 | 43.77 |
| TraesCS6D01G258400.1 | Wheat | plastid | 53.53 | 43.77 |
| Os02t0713700-01 | Rice | cytosol, mitochondrion, nucleus, plastid | 53.16 | 42.56 |
| Zm00001d045928_P001 | Maize | nucleus | 47.58 | 41.83 |
| CDX69136 | Canola | cytosol, nucleus, peroxisome | 46.47 | 41.39 |
| VIT_18s0122g00590.t01 | Wine grape | endoplasmic reticulum, plasma membrane | 47.96 | 40.82 |
| CDX75499 | Canola | cytosol, nucleus, peroxisome | 45.72 | 40.73 |
| KXG19929 | Sorghum | nucleus | 47.96 | 40.57 |
| TraesCS7A01G225700.1 | Wheat | nucleus | 46.84 | 39.01 |
| HORVU7Hr1G046930.1 | Barley | cytosol, nucleus, peroxisome | 45.35 | 38.61 |
| Os06t0326900-01 | Rice | nucleus | 46.1 | 38.51 |
| TraesCS7B01G193900.1 | Wheat | cytosol, nucleus, peroxisome | 45.72 | 38.2 |
| TraesCS7D01G228800.1 | Wheat | nucleus | 44.98 | 38.05 |
| CDX90445 | Canola | plastid | 38.66 | 37.96 |
| CDY53650 | Canola | plastid | 36.06 | 37.31 |
| CDX79838 | Canola | plastid | 36.06 | 37.31 |
| CDX79599 | Canola | cytosol, peroxisome, plastid | 37.55 | 37.0 |
| CDY72485 | Canola | nucleus | 37.17 | 36.63 |
| CDY23160 | Canola | cytosol, nucleus, vacuole | 37.17 | 35.84 |
| CDY12779 | Canola | cytosol, nucleus, vacuole | 37.55 | 35.82 |
| CDX78802 | Canola | cytosol | 38.29 | 35.4 |
| CDY59041 | Canola | cytosol, nucleus, peroxisome | 37.55 | 35.31 |
| CDY54780 | Canola | cytosol | 38.29 | 35.27 |
| CDY70947 | Canola | plastid | 34.2 | 35.25 |
| Zm00001d046696_P001 | Maize | cytosol, nucleus, peroxisome | 35.32 | 35.06 |
| CDY14862 | Canola | plastid | 33.83 | 34.87 |
| CDY18931 | Canola | nucleus | 39.78 | 34.63 |
| CDX74739 | Canola | nucleus | 39.78 | 34.52 |
| EER88668 | Sorghum | cytosol | 34.57 | 34.44 |
| CDY64701 | Canola | nucleus | 39.03 | 33.76 |
| CDY49327 | Canola | cytosol, endoplasmic reticulum, nucleus | 39.41 | 33.76 |
| CDY41211 | Canola | plastid | 36.8 | 33.56 |
| CDY60321 | Canola | plastid | 36.8 | 33.45 |
| CDY68242 | Canola | plastid | 36.8 | 33.33 |
| CDY53687 | Canola | nucleus | 36.8 | 33.22 |
| CDY37040 | Canola | nucleus | 37.55 | 32.79 |
| CDX82978 | Canola | cytosol, nucleus, plastid | 38.29 | 32.7 |
| CDY41289 | Canola | nucleus | 38.29 | 32.7 |
| TraesCS7B01G297300.1 | Wheat | cytosol | 35.32 | 32.53 |
| CDX98771 | Canola | nucleus | 38.29 | 32.49 |
| CDY27387 | Canola | nucleus | 37.55 | 32.37 |
| CDY02949 | Canola | plastid | 36.8 | 32.25 |
| TraesCS7A01G395400.1 | Wheat | cytosol | 34.2 | 31.83 |
| CDX94128 | Canola | nucleus | 38.66 | 31.8 |
| CDY21124 | Canola | cytosol, endoplasmic reticulum, peroxisome | 33.83 | 31.6 |
| CDY30003 | Canola | cytosol, nucleus, peroxisome, plastid | 33.83 | 31.49 |
| CDX76085 | Canola | plastid | 35.69 | 31.27 |
| CDY21451 | Canola | cytosol | 27.88 | 30.61 |
| CDY04391 | Canola | nucleus | 36.8 | 30.28 |
| CDX84222 | Canola | cytosol | 21.56 | 30.21 |
| CDX83182 | Canola | cytosol | 27.51 | 30.2 |
| CDY45266 | Canola | plastid | 22.3 | 29.27 |
| HORVU7Hr1G093230.2 | Barley | cytosol | 32.71 | 29.04 |
| CDY31677 | Canola | cytosol | 21.19 | 28.93 |
| CDY65376 | Canola | nucleus | 23.42 | 22.91 |
Protein Annotations
| MapMan:35.1 | UniProt:A0A078H181 | InterPro:AT-hook_nuclear | EnsemblPlants:CDY31511 | ProteinID:CDY31511 | ProteinID:CDY31511.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003680 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00047816001 |
| InterPro:IPR005175 | PFAM:PF03479 | PIRSF:PIRSF016021 | InterPro:PPC_dom | PFscan:PS51742 | PANTHER:PTHR31100 |
| PANTHER:PTHR31100:SF43 | SUPFAM:SSF117856 | UniParc:UPI0004EDB9DD | SEG:seg | : | : |
Description
BnaC05g16200DAT-hook motif nuclear-localized protein [Source:UniProtKB/TrEMBL;Acc:A0A078H181]
Coordinates
chrLK032273:+:437877..438803
Molecular Weight (calculated)
28417.9 Da
IEP (calculated)
6.972
GRAVY (calculated)
-0.769
Length
269 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGGYEQGGG ASRYFHNLFR PEIHHQQLQQ QGGINLFDQH HQQQQHQQQQ QQPSDDSRES DHSNKDHHQP GLPDSDPATS SSAPGKRPRG RPPGSKNKAK
101: PPIIVTRDSP NALRSHVLEV SPGADIVECV STYARRRGRG VSVLGGNGTV SNVTLRGGVV TLHGRFEILS LTGTVLPPPA PPGAGAPVIL MAASFSNAVF
201: ERLPIEEEEE GGGGGEEGPP QMQQAPSPSP RSGVTGQGQI GGNVGGYGFS SDPHLLGWGA GTPSRPPFN
101: PPIIVTRDSP NALRSHVLEV SPGADIVECV STYARRRGRG VSVLGGNGTV SNVTLRGGVV TLHGRFEILS LTGTVLPPPA PPGAGAPVIL MAASFSNAVF
201: ERLPIEEEEE GGGGGEEGPP QMQQAPSPSP RSGVTGQGQI GGNVGGYGFS SDPHLLGWGA GTPSRPPFN
001: MEGGYEQGGG ASRYFHNLFR PEIHHQQLQP QGGINLIDQH HHQHQQHQQQ QQPSDDSRES DHSNKDHHQQ GRPDSDPNTS SSAPGKRPRG RPPGSKNKAK
101: PPIIVTRDSP NALRSHVLEV SPGADIVESV STYARRRGRG VSVLGGNGTV SNVTLRQPVT PGNGGGVSGG GGVVTLHGRF EILSLTGTVL PPPAPPGAGG
201: LSIFLAGGQG QVVGGSVVAP LIASAPVILM AASFSNAVFE RLPIEEEEEE GGGGGGGGGG GPPQMQQAPS ASPPSGVTGQ GQLGGNVGGY GFSGDPHLLG
301: WGAGTPSRPP F
101: PPIIVTRDSP NALRSHVLEV SPGADIVESV STYARRRGRG VSVLGGNGTV SNVTLRQPVT PGNGGGVSGG GGVVTLHGRF EILSLTGTVL PPPAPPGAGG
201: LSIFLAGGQG QVVGGSVVAP LIASAPVILM AASFSNAVFE RLPIEEEEEE GGGGGGGGGG GPPQMQQAPS ASPPSGVTGQ GQLGGNVGGY GFSGDPHLLG
301: WGAGTPSRPP F
Arabidopsis Description
AHL27AT-hook motif nuclear-localized protein 27 [Source:UniProtKB/Swiss-Prot;Acc:Q9S7C9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.