Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d045928_P001 | Maize | nucleus | 65.53 | 68.95 |
| KXG19929 | Sorghum | nucleus | 66.77 | 67.61 |
| Os02t0713700-01 | Rice | cytosol, mitochondrion, nucleus, plastid | 69.57 | 66.67 |
| TraesCS7A01G225700.1 | Wheat | nucleus | 65.84 | 65.63 |
| HORVU7Hr1G046930.1 | Barley | cytosol, nucleus, peroxisome | 64.29 | 65.51 |
| TraesCS7B01G193900.1 | Wheat | cytosol, nucleus, peroxisome | 64.29 | 64.29 |
| GSMUA_Achr9P12320_001 | Banana | plastid | 55.9 | 64.06 |
| TraesCS7D01G228800.1 | Wheat | nucleus | 63.04 | 63.84 |
| Solyc04g082810.2.1 | Tomato | cytosol, nucleus, peroxisome | 43.79 | 57.55 |
| PGSC0003DMT400025705 | Potato | plastid | 44.1 | 54.62 |
| KRH51551 | Soybean | plastid | 32.92 | 51.96 |
| Os08t0563200-01 | Rice | cytosol | 37.89 | 51.91 |
| CDY20404 | Canola | nucleus | 41.61 | 49.45 |
| CDX87591 | Canola | nucleus | 41.93 | 48.21 |
| CDY45983 | Canola | nucleus | 42.86 | 47.92 |
| Os03t0270000-01 | Rice | nucleus | 38.2 | 47.67 |
| CDX96613 | Canola | nucleus | 44.41 | 47.51 |
| Bra008262.1-P | Field mustard | nucleus | 42.24 | 47.39 |
| Bra015738.1-P | Field mustard | nucleus | 42.24 | 47.22 |
| AT1G20900.1 | Thale cress | nucleus | 45.34 | 46.95 |
| CDY31511 | Canola | nucleus | 38.51 | 46.1 |
| CDX88286 | Canola | cytosol, endoplasmic reticulum, nucleus | 39.44 | 46.01 |
| Bra012256.1-P | Field mustard | nucleus | 44.1 | 45.95 |
| Os02t0820800-00 | Rice | cytosol, nucleus, peroxisome | 37.89 | 45.86 |
| Bra016444.1-P | Field mustard | nucleus | 44.72 | 45.71 |
| CDY01347 | Canola | nucleus | 38.2 | 45.22 |
| CDY31858 | Canola | nucleus | 38.2 | 45.05 |
| AT1G76500.1 | Thale cress | nucleus | 42.24 | 45.03 |
| CDY29494 | Canola | nucleus | 38.2 | 44.89 |
| Bra003717.1-P | Field mustard | nucleus | 39.75 | 44.6 |
| CDY33658 | Canola | nucleus | 40.37 | 44.52 |
| Os08t0159700-01 | Rice | cytosol | 39.75 | 44.29 |
| VIT_18s0122g00590.t01 | Wine grape | endoplasmic reticulum, plasma membrane | 43.17 | 43.99 |
| Bra025854.1-P | Field mustard | nucleus | 38.82 | 43.71 |
| CDX68095 | Canola | cytosol | 36.34 | 43.33 |
| CDX85952 | Canola | cytosol | 35.71 | 42.28 |
| Os04t0590200-01 | Rice | cytosol | 39.75 | 41.97 |
| Os02t0448000-00 | Rice | nucleus | 39.13 | 39.87 |
| Os07t0235200-01 | Rice | endoplasmic reticulum, extracellular | 22.98 | 39.15 |
| Os06t0136900-01 | Rice | nucleus | 39.44 | 38.72 |
| Os01t0953801-00 | Rice | nucleus | 27.64 | 33.58 |
| Os01t0246601-00 | Rice | plastid | 22.67 | 32.02 |
| Os08t0478466-01 | Rice | nucleus | 29.5 | 29.32 |
| Os09t0464300-00 | Rice | nucleus | 29.5 | 28.44 |
Protein Annotations
| Gene3D:3.30.1330.80 | MapMan:35.1 | EntrezGene:9271930 | EMBL:AK242108 | InterPro:AT-hook_nuclear | ProteinID:BAD33253.1 |
| ProteinID:BAD33507.1 | ProteinID:BAH93490.1 | ProteinID:BAS97536.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003680 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR005175 | EnsemblPlantsGene:Os06g0326900 | EnsemblPlants:Os06t0326900-01 | PFAM:PF03479 |
| PIRSF:PIRSF016021 | InterPro:PPC_dom | PFscan:PS51742 | PANTHER:PTHR31100 | PANTHER:PTHR31100:SF5 | UniProt:Q69PS9 |
| SUPFAM:SSF117856 | UniParc:UPI00003FF347 | RefSeq:XP_015644343.1 | RefSeq:XP_015644344.1 | SEG:seg | : |
Description
Protein of unknown function DUF296 domain containing protein. (Os06t0326900-01)
Coordinates
chr6:+:12825419..12827564
Molecular Weight (calculated)
32011.6 Da
IEP (calculated)
5.556
GRAVY (calculated)
-0.262
Length
322 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGMDPTGGG GGGGVAAHYL HMLRAQQHQP LSPAGDVKAE RSMLSPDESP GADADLGSDH PTSSAMVAAE DSGGGSGSGG PMRRPRGRPL GSKNKPKPPI
101: IVTRDSPNAF HSHVLEVAAG TDIVECVCEF ARRRGRGVSV LSGGGAVANV ALRQPGASPP GSLVATMRGQ FEILSLTGTV LPPPAPPSAS GLTVFLSGGQ
201: GQVVGGSVAG QLIAAGPVFL MAASFANAVY ERLPLDGEDP EAEAAAATPP GDAAQPTGPP PPQQQPTASQ SSEVTAGDGG GGGGLGMYLG GHVGSYQQQQ
301: QQLPGPGDNF GSWSGSIRPP PF
101: IVTRDSPNAF HSHVLEVAAG TDIVECVCEF ARRRGRGVSV LSGGGAVANV ALRQPGASPP GSLVATMRGQ FEILSLTGTV LPPPAPPSAS GLTVFLSGGQ
201: GQVVGGSVAG QLIAAGPVFL MAASFANAVY ERLPLDGEDP EAEAAAATPP GDAAQPTGPP PPQQQPTASQ SSEVTAGDGG GGGGLGMYLG GHVGSYQQQQ
301: QQLPGPGDNF GSWSGSIRPP PF
001: MEGGYEQGGG ASRYFHNLFR PEIHHQQLQP QGGINLIDQH HHQHQQHQQQ QQPSDDSRES DHSNKDHHQQ GRPDSDPNTS SSAPGKRPRG RPPGSKNKAK
101: PPIIVTRDSP NALRSHVLEV SPGADIVESV STYARRRGRG VSVLGGNGTV SNVTLRQPVT PGNGGGVSGG GGVVTLHGRF EILSLTGTVL PPPAPPGAGG
201: LSIFLAGGQG QVVGGSVVAP LIASAPVILM AASFSNAVFE RLPIEEEEEE GGGGGGGGGG GPPQMQQAPS ASPPSGVTGQ GQLGGNVGGY GFSGDPHLLG
301: WGAGTPSRPP F
101: PPIIVTRDSP NALRSHVLEV SPGADIVESV STYARRRGRG VSVLGGNGTV SNVTLRQPVT PGNGGGVSGG GGVVTLHGRF EILSLTGTVL PPPAPPGAGG
201: LSIFLAGGQG QVVGGSVVAP LIASAPVILM AASFSNAVFE RLPIEEEEEE GGGGGGGGGG GPPQMQQAPS ASPPSGVTGQ GQLGGNVGGY GFSGDPHLLG
301: WGAGTPSRPP F
Arabidopsis Description
AHL27AT-hook motif nuclear-localized protein 27 [Source:UniProtKB/Swiss-Prot;Acc:Q9S7C9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.