Factsheet for Os01t0246601-00

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 6
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G198900.1	Wheat	plastid	67.54	73.33
TraesCS3A01G167300.1	Wheat	plastid	67.98	72.77
HORVU3Hr1G033710.2	Barley	plastid	67.11	71.83
TraesCS3D01G173400.1	Wheat	plastid	66.23	70.89
Zm00001d039249_P001	Maize	cytosol	47.81	70.32
EER99980	Sorghum	plastid	58.77	63.51
Zm00001d009031_P001	Maize	mitochondrion, plastid	55.26	62.07
Os08t0563200-01	Rice	cytosol	34.21	33.19
Os07t0235200-01	Rice	endoplasmic reticulum, extracellular	26.75	32.28
Os08t0159700-01	Rice	cytosol	39.47	31.14
Os03t0270000-01	Rice	nucleus	35.09	31.01
Os02t0820800-00	Rice	cytosol, nucleus, peroxisome	35.09	30.08
Os04t0590200-01	Rice	cytosol	39.47	29.51
Os01t0953801-00	Rice	nucleus	32.46	27.92
Os02t0448000-00	Rice	nucleus	35.09	25.32
Os06t0136900-01	Rice	nucleus	35.53	24.7
Os02t0713700-01	Rice	cytosol, mitochondrion, nucleus, plastid	35.53	24.11
Os06t0326900-01	Rice	nucleus	32.02	22.67
Os08t0478466-01	Rice	nucleus	30.26	21.3
Os09t0464300-00	Rice	nucleus	31.14	21.26

Protein Annotations

MapMan:35.2	EntrezGene:9266353	ProteinID:BAE95821.1	ProteinID:BAH90985.1	ProteinID:BAS71316.1	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003680	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR005175	EnsemblPlantsGene:Os01g0246601	EnsemblPlants:Os01t0246601-00
PFAM:PF03479	InterPro:PPC_dom	PFscan:PS51742	PANTHER:PTHR31100	PANTHER:PTHR31100:SF11	UniProt:Q1EHT3
SUPFAM:SSF117856	UniParc:UPI0000D855F6	RefSeq:XP_015644097.1	SEG:seg	:	:

Description

Protein of unknown function DUF296 domain containing protein. (Os01t0246601-00)

Coordinates

chr1:-:8071122..8071808

Molecular Weight (calculated)

22647.8 Da

IEP (calculated)

10.939

GRAVY (calculated)

0.273

Length

228 amino acids

Sequence
(BLAST)

001: MGVVTANDAA AAAPGKLRRP SRAAAAALCP CKGRGAPKPP PVAVIAHECP SAMRALVVEV PAGRDVVSCV AAVARRARRG ALVLGASGRV ADVVLREPAA
101: VVLRGTMEIL GLAGCFFPSP PPHAAAEGAP GGGGASAAVF LAGPRGGVLG GGVAPGGLVA AGPVVVVLAT FVAAAFDRLP LLKGEETANS EGCDVHGVTR
201: RRRCGAQPPQ QQQQRCGWAL CRKLGAKS

Best Arabidopsis Sequence Match ( AT2G35270.1 )
(BLAST)

001: MAGLDLGTTS RYVHNVDGGG GGQFTTDNHH EDDGGAGGNH HHHHHNHNHH QGLDLIASND NSGLGGGGGG GSGDLVMRRP RGRPAGSKNK PKPPVIVTRE
101: SANTLRAHIL EVGSGCDVFE CISTYARRRQ RGICVLSGTG TVTNVSIRQP TAAGAVVTLR GTFEILSLSG SFLPPPAPPG ATSLTIFLAG AQGQVVGGNV
201: VGELMAAGPV MVMAASFTNV AYERLPLDEH EEHLQSGGGG GGGNMYSEAT GGGGGLPFFN LPMSMPQIGV ESWQGNHAGA GRAPF

Arabidopsis Description

AHL21AT-hook motif nuclear-localized protein 21 [Source:UniProtKB/Swiss-Prot;Acc:O82166]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.