Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 2
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| nucleus:
23303719
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr7P19000_001 | Banana | cytosol, plasma membrane, plastid | 35.19 | 61.29 |
| KXG25333 | Sorghum | cytosol | 59.26 | 57.66 |
| Zm00001d031826_P001 | Maize | cytosol, endoplasmic reticulum, nucleus | 52.16 | 57.48 |
| Os09t0464300-00 | Rice | nucleus | 57.72 | 55.99 |
| GSMUA_Achr8P23410_001 | Banana | cytosol | 34.57 | 54.63 |
| GSMUA_Achr10P... | Banana | nucleus | 45.06 | 52.33 |
| GSMUA_Achr3P06770_001 | Banana | cytosol | 32.41 | 46.26 |
| GSMUA_AchrUn_... | Banana | nucleus | 44.14 | 42.69 |
| Os08t0563200-01 | Rice | cytosol | 30.86 | 42.55 |
| Bra026211.1-P | Field mustard | plastid | 25.93 | 40.98 |
| CDY45266 | Canola | plastid | 25.93 | 40.98 |
| KRH72453 | Soybean | nucleus | 33.64 | 40.22 |
| AT1G14490.2 | Thale cress | plastid | 27.78 | 40.0 |
| KRH62181 | Soybean | nucleus | 34.57 | 40.0 |
| PGSC0003DMT400024250 | Potato | cytosol, plastid | 33.02 | 39.78 |
| VIT_18s0001g07380.t01 | Wine grape | nucleus | 29.94 | 39.59 |
| KRH52892 | Soybean | nucleus | 34.57 | 39.44 |
| CDY21451 | Canola | cytosol | 29.63 | 39.18 |
| CDX83182 | Canola | cytosol | 29.63 | 39.18 |
| Os03t0270000-01 | Rice | nucleus | 30.86 | 38.76 |
| KRH16838 | Soybean | nucleus | 29.63 | 37.5 |
| Bra000593.1-P | Field mustard | cytosol | 30.25 | 37.26 |
| Os02t0820800-00 | Rice | cytosol, nucleus, peroxisome | 29.94 | 36.47 |
| Os08t0159700-01 | Rice | cytosol | 31.79 | 35.64 |
| AT5G49700.1 | Thale cress | nucleus | 30.25 | 35.51 |
| Os01t0953801-00 | Rice | nucleus | 28.4 | 34.72 |
| Os07t0235200-01 | Rice | endoplasmic reticulum, extracellular | 19.75 | 33.86 |
| Solyc04g076220.2.1 | Tomato | nucleus | 34.88 | 33.63 |
| Os04t0590200-01 | Rice | cytosol | 31.48 | 33.44 |
| Os02t0713700-01 | Rice | cytosol, mitochondrion, nucleus, plastid | 33.33 | 32.14 |
| Solyc12g087950.1.1 | Tomato | nucleus | 26.23 | 31.95 |
| CDY65376 | Canola | nucleus | 26.85 | 31.64 |
| PGSC0003DMT400005182 | Potato | nucleus | 25.93 | 31.34 |
| Os01t0246601-00 | Rice | plastid | 21.3 | 30.26 |
| Os06t0326900-01 | Rice | nucleus | 29.32 | 29.5 |
| Os06t0136900-01 | Rice | nucleus | 28.7 | 28.35 |
| Os02t0448000-00 | Rice | nucleus | 27.47 | 28.16 |
Protein Annotations
| Gene3D:3.30.1330.80 | MapMan:35.2 | EntrezGene:9268405 | ProteinID:BAD09008.1 | ProteinID:BAH94358.1 | ProteinID:BAT05901.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003680 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR005175 |
| EnsemblPlantsGene:Os08g0478466 | EnsemblPlants:Os08t0478466-01 | PFAM:PF03479 | InterPro:PPC_dom | PFscan:PS51742 | PANTHER:PTHR31100 |
| PANTHER:PTHR31100:SF41 | UniProt:Q6ZJC3 | SUPFAM:SSF117856 | UniParc:UPI000023ACB5 | RefSeq:XP_015648918.1 | RefSeq:XP_015648919.1 |
| SEG:seg | : | : | : | : | : |
Description
Protein of unknown function DUF296 domain containing protein. (Os08t0478466-01)
Coordinates
chr8:-:23589354..23590687
Molecular Weight (calculated)
32284.3 Da
IEP (calculated)
8.503
GRAVY (calculated)
-0.060
Length
324 amino acids
Sequence
(BLAST)
(BLAST)
001: MERRSQLGGG EGDGKLVVGG GAMGEKKQQL ECFSDEVDSR DGGGGAAEET TAGGGGEGVA AVVVVGKRRR GRPPGSKNKP KPPVVVTREA AAAEPAAAAA
101: MRSHVLEIPG GGDVAGALAG YARRRGLGIC VLAGTGAVAN VSLRHPLPSG AAAEIGGGAA AAVVVFHGRY EILSISATFL PPAMAAAAPR AALGGLSISL
201: AGPHGQIFGG AVAGPLVAAT TVVVVAAAFA SPTFHRLPAE YDDAPAPVSG SGADADEHRG RRRTEPPEHH HLTPLHPRGI ALATATTTTT TQPVYASACQ
301: HEEVWPPAAA AAAASAPRPR PPYQ
101: MRSHVLEIPG GGDVAGALAG YARRRGLGIC VLAGTGAVAN VSLRHPLPSG AAAEIGGGAA AAVVVFHGRY EILSISATFL PPAMAAAAPR AALGGLSISL
201: AGPHGQIFGG AVAGPLVAAT TVVVVAAAFA SPTFHRLPAE YDDAPAPVSG SGADADEHRG RRRTEPPEHH HLTPLHPRGI ALATATTTTT TQPVYASACQ
301: HEEVWPPAAA AAAASAPRPR PPYQ
001: MKGEYREQKS NEMFSKLPHH QQQQQQQQQQ HSLTSHFHLS STVTPTVDDS SIEVVRRPRG RPPGSKNKPK PPVFVTRDTD PPMSPYILEV PSGNDVVEAI
101: NRFCRRKSIG VCVLSGSGSV ANVTLRQPSP AALGSTITFH GKFDLLSVSA TFLPPPPRTS LSPPVSNFFT VSLAGPQGQI IGGFVAGPLI SAGTVYVIAA
201: SFNNPSYHRL PAEEEQKHSA GTGEREGQSP PVSGGGEESG QMAGSGGESC GVSMYSCHMG GSDVIWAPTA RAPPPY
101: NRFCRRKSIG VCVLSGSGSV ANVTLRQPSP AALGSTITFH GKFDLLSVSA TFLPPPPRTS LSPPVSNFFT VSLAGPQGQI IGGFVAGPLI SAGTVYVIAA
201: SFNNPSYHRL PAEEEQKHSA GTGEREGQSP PVSGGGEESG QMAGSGGESC GVSMYSCHMG GSDVIWAPTA RAPPPY
Arabidopsis Description
AHL17AT-hook motif nuclear-localized protein 17 [Source:UniProtKB/Swiss-Prot;Acc:Q9LTA2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.