Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 3
- cytosol 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d017825_P001 | Maize | plastid | 88.1 | 91.36 |
| TraesCS6B01G306100.1 | Wheat | plastid | 89.29 | 91.19 |
| EES05630 | Sorghum | cytosol, mitochondrion, nucleus, plastid | 88.99 | 91.16 |
| TraesCS6D01G258400.1 | Wheat | plastid | 88.99 | 90.88 |
| HORVU6Hr1G070090.1 | Barley | plastid | 88.39 | 89.73 |
| TraesCS6A01G277700.1 | Wheat | plastid | 86.9 | 89.3 |
| GSMUA_Achr9P12320_001 | Banana | plastid | 58.63 | 70.11 |
| Os06t0326900-01 | Rice | nucleus | 66.67 | 69.57 |
| Solyc04g082810.2.1 | Tomato | cytosol, nucleus, peroxisome | 44.64 | 61.22 |
| PGSC0003DMT400025705 | Potato | plastid | 46.43 | 60.0 |
| KRH51551 | Soybean | plastid | 34.82 | 57.35 |
| CDX87591 | Canola | nucleus | 47.62 | 57.14 |
| Os08t0563200-01 | Rice | cytosol | 39.58 | 56.6 |
| CDY20404 | Canola | nucleus | 45.54 | 56.46 |
| Bra015738.1-P | Field mustard | nucleus | 47.32 | 55.21 |
| CDX96613 | Canola | nucleus | 49.4 | 55.15 |
| CDY45983 | Canola | nucleus | 47.02 | 54.86 |
| Bra008262.1-P | Field mustard | nucleus | 46.43 | 54.36 |
| CDX88286 | Canola | cytosol, endoplasmic reticulum, nucleus | 44.64 | 54.35 |
| AT1G20900.1 | Thale cress | nucleus | 49.4 | 53.38 |
| CDY31511 | Canola | nucleus | 42.56 | 53.16 |
| Bra012256.1-P | Field mustard | nucleus | 48.51 | 52.75 |
| Bra016444.1-P | Field mustard | nucleus | 49.4 | 52.7 |
| AT1G76500.1 | Thale cress | nucleus | 47.32 | 52.65 |
| CDY01347 | Canola | nucleus | 42.56 | 52.57 |
| CDY33658 | Canola | nucleus | 44.94 | 51.71 |
| CDY31858 | Canola | nucleus | 41.96 | 51.65 |
| Bra003717.1-P | Field mustard | nucleus | 44.05 | 51.57 |
| CDX68095 | Canola | cytosol | 41.37 | 51.48 |
| CDY29494 | Canola | nucleus | 41.67 | 51.09 |
| Os02t0820800-00 | Rice | cytosol, nucleus, peroxisome | 39.58 | 50.0 |
| CDX85952 | Canola | cytosol | 40.48 | 50.0 |
| Bra025854.1-P | Field mustard | nucleus | 42.56 | 50.0 |
| Os04t0590200-01 | Rice | cytosol | 45.24 | 49.84 |
| VIT_18s0122g00590.t01 | Wine grape | endoplasmic reticulum, plasma membrane | 45.83 | 48.73 |
| Os08t0159700-01 | Rice | cytosol | 41.07 | 47.75 |
| Os03t0270000-01 | Rice | nucleus | 36.31 | 47.29 |
| Os02t0448000-00 | Rice | nucleus | 44.35 | 47.15 |
| Os07t0235200-01 | Rice | endoplasmic reticulum, extracellular | 25.0 | 44.44 |
| Os06t0136900-01 | Rice | nucleus | 41.67 | 42.68 |
| Os01t0246601-00 | Rice | plastid | 24.11 | 35.53 |
| Os01t0953801-00 | Rice | nucleus | 27.38 | 34.72 |
| Os08t0478466-01 | Rice | nucleus | 32.14 | 33.33 |
| Os09t0464300-00 | Rice | nucleus | 30.06 | 30.24 |
Protein Annotations
| Gene3D:3.30.1330.80 | MapMan:35.1 | EntrezGene:4330508 | EMBL:AK241201 | ProteinID:BAD07790.1 | ProteinID:BAF09828.1 |
| ProteinID:BAS80586.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003680 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR005175 |
| EnsemblPlantsGene:Os02g0713700 | EnsemblPlants:Os02t0713700-01 | PFAM:PF03479 | InterPro:PPC_dom | PFscan:PS51742 | PANTHER:PTHR31100 |
| PANTHER:PTHR31100:SF5 | UniProt:Q6ZFU2 | SUPFAM:SSF117856 | UniParc:UPI00002367E5 | RefSeq:XP_015627724.1 | SEG:seg |
Description
Protein of unknown function DUF296 domain containing protein. (Os02t0713700-01)
Coordinates
chr2:-:29571841..29573542
Molecular Weight (calculated)
32671.4 Da
IEP (calculated)
7.274
GRAVY (calculated)
-0.204
Length
336 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGMDPGGGG AGAGSSRYFH HLLRPQQPSP LSPLSPTSHV KMEHSKMSPD KSPVGEGDHA GGSGSGGVGG DHQPSSSAMV PVEGGSGSAG GSGSGGPTRR
101: PRGRPPGSKN KPKPPIIVTR DSPNALHSHV LEVAGGADVV DCVAEYARRR GRGVCVLSGG GAVVNVALRQ PGASPPGSMV ATLRGRFEIL SLTGTVLPPP
201: APPGASGLTV FLSGGQGQVI GGSVVGPLVA AGPVVLMAAS FANAVYERLP LEGEEEEVAA PAAGGEAQDQ VAQSAGPPGQ QPAASQSSGV TGGDGTGGAG
301: GMSLYNLAGN VGGYQLPGDN FGGWSGAGAG GVRPPF
101: PRGRPPGSKN KPKPPIIVTR DSPNALHSHV LEVAGGADVV DCVAEYARRR GRGVCVLSGG GAVVNVALRQ PGASPPGSMV ATLRGRFEIL SLTGTVLPPP
201: APPGASGLTV FLSGGQGQVI GGSVVGPLVA AGPVVLMAAS FANAVYERLP LEGEEEEVAA PAAGGEAQDQ VAQSAGPPGQ QPAASQSSGV TGGDGTGGAG
301: GMSLYNLAGN VGGYQLPGDN FGGWSGAGAG GVRPPF
001: MDGGYDQSGG ASRYFHNLFR PELHHQLQPQ PQLHPLPQPQ PQPQPQQQNS DDESDSNKDP GSDPVTSGST GKRPRGRPPG SKNKPKPPVI VTRDSPNVLR
101: SHVLEVSSGA DIVESVTTYA RRRGRGVSIL SGNGTVANVS LRQPATTAAH GANGGTGGVV ALHGRFEILS LTGTVLPPPA PPGSGGLSIF LSGVQGQVIG
201: GNVVAPLVAS GPVILMAASF SNATFERLPL EDEGGEGGEG GEVGEGGGGE GGPPPATSSS PPSGAGQGQL RGNMSGYDQF AGDPHLLGWG AAAAAAPPRP
301: AF
101: SHVLEVSSGA DIVESVTTYA RRRGRGVSIL SGNGTVANVS LRQPATTAAH GANGGTGGVV ALHGRFEILS LTGTVLPPPA PPGSGGLSIF LSGVQGQVIG
201: GNVVAPLVAS GPVILMAASF SNATFERLPL EDEGGEGGEG GEVGEGGGGE GGPPPATSSS PPSGAGQGQL RGNMSGYDQF AGDPHLLGWG AAAAAAPPRP
301: AF
Arabidopsis Description
AHL29AT-hook motif nuclear-localized protein 29 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9K7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.