Factsheet for Bra025854.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY31511	Canola	nucleus	92.31	98.14
CDY29494	Canola	nucleus	93.71	97.81
AT1G20900.1	Thale cress	nucleus	92.66	85.21
Bra016444.1-P	Field mustard	nucleus	91.26	82.86
Bra012256.1-P	Field mustard	nucleus	88.11	81.55
Bra015738.1-P	Field mustard	nucleus	67.13	66.67
Bra008262.1-P	Field mustard	nucleus	66.08	65.85
Bra003717.1-P	Field mustard	nucleus	65.03	64.81
Solyc04g082810.2.1	Tomato	cytosol, nucleus, peroxisome	45.1	52.65
KRH51551	Soybean	plastid	36.01	50.49
PGSC0003DMT400025705	Potato	plastid	45.8	50.38
GSMUA_Achr9P12320_001	Banana	plastid	44.41	45.2
TraesCS6A01G277700.1	Wheat	plastid	50.7	44.34
Zm00001d051620_P001	Maize	plastid	48.95	44.16
Zm00001d017825_P001	Maize	plastid	50.0	44.14
EES05630	Sorghum	cytosol, mitochondrion, nucleus, plastid	50.35	43.9
HORVU6Hr1G070090.1	Barley	plastid	50.7	43.81
TraesCS6D01G258400.1	Wheat	plastid	50.35	43.77
TraesCS6B01G306100.1	Wheat	plastid	50.35	43.77
Os02t0713700-01	Rice	cytosol, mitochondrion, nucleus, plastid	50.0	42.56
Zm00001d045928_P001	Maize	nucleus	45.1	42.16
Bra011612.1-P	Field mustard	cytosol, nucleus, peroxisome	44.06	41.72
VIT_18s0122g00590.t01	Wine grape	endoplasmic reticulum, plasma membrane	45.45	41.14
KXG19929	Sorghum	nucleus	45.45	40.88
TraesCS7A01G225700.1	Wheat	nucleus	44.41	39.32
HORVU7Hr1G046930.1	Barley	cytosol, nucleus, peroxisome	43.01	38.92
Os06t0326900-01	Rice	nucleus	43.71	38.82
TraesCS7B01G193900.1	Wheat	cytosol, nucleus, peroxisome	43.36	38.51
TraesCS7D01G228800.1	Wheat	nucleus	42.66	38.36
Bra004732.1-P	Field mustard	plastid	34.27	37.55
Bra000281.1-P	Field mustard	plastid	33.57	36.78
Bra012639.1-P	Field mustard	cytosol	37.06	36.43
Bra016853.1-P	Field mustard	plastid	33.22	36.4
Bra005355.1-P	Field mustard	cytosol	36.01	36.27
Bra040183.1-P	Field mustard	cytosol	37.06	36.18
Bra017324.1-P	Field mustard	cytosol, nucleus, peroxisome	36.01	36.01
Bra004911.1-P	Field mustard	nucleus	37.76	35.06
Zm00001d046696_P001	Maize	cytosol, nucleus, peroxisome	33.22	35.06
Bra040184.1-P	Field mustard	cytosol, nucleus, peroxisome	38.46	35.03
Bra003217.1-P	Field mustard	nucleus	36.36	34.9
Bra007176.1-P	Field mustard	plastid	36.01	34.68
EER88668	Sorghum	cytosol	32.52	34.44
Bra039338.1-P	Field mustard	nucleus	35.66	33.12
TraesCS7B01G297300.1	Wheat	cytosol	33.22	32.53
Bra014735.1-P	Field mustard	plastid	34.62	32.25
Bra013649.1-P	Field mustard	nucleus	36.36	31.9
TraesCS7A01G395400.1	Wheat	cytosol	32.17	31.83
Bra019355.1-P	Field mustard	nucleus	36.36	31.8
Bra040135.1-P	Field mustard	cytosol, nucleus, peroxisome	31.82	30.85
Bra023007.1-P	Field mustard	cytosol, nucleus, peroxisome	36.01	30.38
Bra026211.1-P	Field mustard	plastid	21.68	30.24
Bra000593.1-P	Field mustard	cytosol	27.27	29.66
HORVU7Hr1G093230.2	Barley	cytosol	30.77	29.04

Protein Annotations

Gene3D:3.30.1330.80	MapMan:35.1	InterPro:AT-hook_nuclear	EnsemblPlantsGene:Bra025854	EnsemblPlants:Bra025854.1	EnsemblPlants:Bra025854.1-P
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003680	GO:GO:0003700	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR005175
UniProt:M4EAP5	PFAM:PF03479	PIRSF:PIRSF016021	InterPro:PPC_dom	PFscan:PS51742	PANTHER:PTHR31100
PANTHER:PTHR31100:SF43	SUPFAM:SSF117856	UniParc:UPI000253EFE1	SEG:seg	:	:

Description

AT1G20900 (E=2e-041) ESC, ORE7, AHL27 | ESC (ESCAROLA); double-stranded DNA binding

Coordinates

chrA06:+:8452918..8453852

Molecular Weight (calculated)

29941.7 Da

IEP (calculated)

7.181

GRAVY (calculated)

-0.766

Length

286 amino acids

Sequence
(BLAST)

001: MEGGYEQGGG ASRYFHNLFR PEIHHQQLQQ QGGINLFDQH HQQQQHQQQQ QQQPSDDSRE SDHSNKDHHQ PGLPDSDPAT SSSAPGKRPR GRPPGSKNKA
101: KPPIIVTRDS PNALRSHVLE VSPGADIVEC VSTYARRRGR GVSVLGGNGT VSNVTLRQPV TPGNSGGGAG GGVVTLHGRF EILSLTGTVL PPPSPPGAGA
201: PVILMAASFS NAVFERLPIE EEEERGGGGV GEGEGPPQMQ QAPSPSPRSG VTGQGQLGGN VGGYGFSSDP HLLGWGAGTP SRPPFT

Best Arabidopsis Sequence Match ( AT1G20900.1 )
(BLAST)

001: MEGGYEQGGG ASRYFHNLFR PEIHHQQLQP QGGINLIDQH HHQHQQHQQQ QQPSDDSRES DHSNKDHHQQ GRPDSDPNTS SSAPGKRPRG RPPGSKNKAK
101: PPIIVTRDSP NALRSHVLEV SPGADIVESV STYARRRGRG VSVLGGNGTV SNVTLRQPVT PGNGGGVSGG GGVVTLHGRF EILSLTGTVL PPPAPPGAGG
201: LSIFLAGGQG QVVGGSVVAP LIASAPVILM AASFSNAVFE RLPIEEEEEE GGGGGGGGGG GPPQMQQAPS ASPPSGVTGQ GQLGGNVGGY GFSGDPHLLG
301: WGAGTPSRPP F

Arabidopsis Description

AHL27AT-hook motif nuclear-localized protein 27 [Source:UniProtKB/Swiss-Prot;Acc:Q9S7C9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.