Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G228800.1 | Wheat | nucleus | 92.26 | 93.71 |
| TraesCS7B01G193900.1 | Wheat | cytosol, nucleus, peroxisome | 92.88 | 93.17 |
| HORVU7Hr1G046930.1 | Barley | cytosol, nucleus, peroxisome | 88.24 | 90.19 |
| Os06t0326900-01 | Rice | nucleus | 65.63 | 65.84 |
| Zm00001d045928_P001 | Maize | nucleus | 62.23 | 65.69 |
| TraesCS6A01G277700.1 | Wheat | plastid | 66.25 | 65.44 |
| KXG19929 | Sorghum | nucleus | 64.4 | 65.41 |
| GSMUA_Achr9P12320_001 | Banana | plastid | 55.11 | 63.35 |
| Solyc04g082810.2.1 | Tomato | cytosol, nucleus, peroxisome | 43.34 | 57.14 |
| PGSC0003DMT400025705 | Potato | plastid | 43.96 | 54.62 |
| KRH51551 | Soybean | plastid | 33.44 | 52.94 |
| CDY20404 | Canola | nucleus | 40.56 | 48.34 |
| CDX87591 | Canola | nucleus | 41.8 | 48.21 |
| Bra012256.1-P | Field mustard | nucleus | 45.82 | 47.9 |
| CDX96613 | Canola | nucleus | 44.58 | 47.84 |
| AT1G20900.1 | Thale cress | nucleus | 45.51 | 47.27 |
| CDY45983 | Canola | nucleus | 42.11 | 47.22 |
| CDX88286 | Canola | cytosol, endoplasmic reticulum, nucleus | 40.25 | 47.1 |
| CDY33658 | Canola | nucleus | 42.41 | 46.92 |
| Bra015738.1-P | Field mustard | nucleus | 41.8 | 46.88 |
| CDY31511 | Canola | nucleus | 39.01 | 46.84 |
| CDY01347 | Canola | nucleus | 39.32 | 46.69 |
| Bra008262.1-P | Field mustard | nucleus | 41.49 | 46.69 |
| TraesCS4A01G094700.1 | Wheat | cytosol, nucleus, plastid | 36.53 | 46.09 |
| Bra016444.1-P | Field mustard | nucleus | 44.89 | 46.03 |
| CDY31858 | Canola | nucleus | 38.7 | 45.79 |
| TraesCS7A01G299100.1 | Wheat | cytosol, nucleus, plastid | 40.25 | 45.77 |
| CDY29494 | Canola | nucleus | 38.7 | 45.62 |
| TraesCS6A01G053800.1 | Wheat | nucleus | 39.01 | 44.68 |
| TraesCS4A01G312400.1 | Wheat | nucleus | 39.32 | 44.56 |
| Bra025854.1-P | Field mustard | nucleus | 39.32 | 44.41 |
| AT1G76500.1 | Thale cress | nucleus | 41.49 | 44.37 |
| TraesCS6A01G399200.1 | Wheat | cytosol, extracellular, peroxisome | 39.63 | 44.14 |
| Bra003717.1-P | Field mustard | nucleus | 38.7 | 43.55 |
| VIT_18s0122g00590.t01 | Wine grape | endoplasmic reticulum, plasma membrane | 42.41 | 43.35 |
| TraesCS7A01G395400.1 | Wheat | cytosol | 38.7 | 43.25 |
| CDX68095 | Canola | cytosol | 35.91 | 42.96 |
| TraesCS6A01G176200.1 | Wheat | nucleus | 40.56 | 42.39 |
| TraesCS2A01G449300.1 | Wheat | cytosol, nucleus, peroxisome | 40.87 | 41.9 |
| CDX85952 | Canola | cytosol | 34.98 | 41.54 |
| TraesCS1A01G043100.1 | Wheat | mitochondrion, nucleus | 39.94 | 39.81 |
| TraesCS7A01G076500.1 | Wheat | cytosol, endoplasmic reticulum, nucleus | 39.63 | 36.99 |
| TraesCS3A01G167300.1 | Wheat | plastid | 24.15 | 36.62 |
| TraesCS4A01G374700.1 | Wheat | nucleus | 39.32 | 36.08 |
| TraesCS3A01G490800.1 | Wheat | cytosol | 26.01 | 29.79 |
| TraesCS5A01G245800.1 | Wheat | cytosol, endoplasmic reticulum, nucleus | 28.17 | 26.76 |
Protein Annotations
| EnsemblPlants:TraesCS7A01G225700.1 | EnsemblPlantsGene:TraesCS7A01G225700 | Gene3D:3.30.1330.80 | InterPro:AT-hook_nuclear | InterPro:IPR005175 | InterPro:PPC_dom |
| PANTHER:PTHR31100 | PANTHER:PTHR31100:SF5 | PFAM:PF03479 | PFscan:PS51742 | PIRSF:PIRSF016021 | SEG:seg |
| SUPFAM:SSF117856 | TIGR:cd11378 | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr7A:-:195217267..195218238
Molecular Weight (calculated)
32371.2 Da
IEP (calculated)
6.718
GRAVY (calculated)
-0.138
Length
323 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGMDPGAGE PRGASHYLDL LLAQQQQSTP FSPFAHVKAE HHSMASPVRS PASGAGAGQH GGGADQQQPS SSAMVLADGG GGPARPMRRP RGRPPGSKNK
101: PKPPIIVMRD SPNAFHSHIL EVADGADIVE CLAEYARRRR RGVCVLSGAG VVTNVALRQP GAPSSSSPGG LVATLQGQFE ILSLTGTVLP PPAPPAASSL
201: AVYLAGWQGQ VVGGSVVGQL VAAGPVFLMA ASFANAVYER LPLEGEAEEA GTATAATEAQ GAAAAAQSPG ALPQQPAASQ SSEVTGGEAG GLGMPLCNLE
301: GNVGSYHLPG PGDNLGSWSG VRP
101: PKPPIIVMRD SPNAFHSHIL EVADGADIVE CLAEYARRRR RGVCVLSGAG VVTNVALRQP GAPSSSSPGG LVATLQGQFE ILSLTGTVLP PPAPPAASSL
201: AVYLAGWQGQ VVGGSVVGQL VAAGPVFLMA ASFANAVYER LPLEGEAEEA GTATAATEAQ GAAAAAQSPG ALPQQPAASQ SSEVTGGEAG GLGMPLCNLE
301: GNVGSYHLPG PGDNLGSWSG VRP
001: MDGGYDQSGG ASRYFHNLFR PELHHQLQPQ PQLHPLPQPQ PQPQPQQQNS DDESDSNKDP GSDPVTSGST GKRPRGRPPG SKNKPKPPVI VTRDSPNVLR
101: SHVLEVSSGA DIVESVTTYA RRRGRGVSIL SGNGTVANVS LRQPATTAAH GANGGTGGVV ALHGRFEILS LTGTVLPPPA PPGSGGLSIF LSGVQGQVIG
201: GNVVAPLVAS GPVILMAASF SNATFERLPL EDEGGEGGEG GEVGEGGGGE GGPPPATSSS PPSGAGQGQL RGNMSGYDQF AGDPHLLGWG AAAAAAPPRP
301: AF
101: SHVLEVSSGA DIVESVTTYA RRRGRGVSIL SGNGTVANVS LRQPATTAAH GANGGTGGVV ALHGRFEILS LTGTVLPPPA PPGSGGLSIF LSGVQGQVIG
201: GNVVAPLVAS GPVILMAASF SNATFERLPL EDEGGEGGEG GEVGEGGGGE GGPPPATSSS PPSGAGQGQL RGNMSGYDQF AGDPHLLGWG AAAAAAPPRP
301: AF
Arabidopsis Description
AHL29AT-hook motif nuclear-localized protein 29 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9K7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.